Parental gene:

ENSOCUG00000015651

Aliases:None
Description:Autophagy-related protein 3 [Source:UniProtKB/TrEMBL;Acc:G1T9W9]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:14:106635019..106677946(+)


>ENSOCUG00000015651
ATGCAGAATGTGATTAACACGGTGAAGGGAAAGGCCCTGGAAGTAGCTGAGTACCTGACGCCGGTCCTCAAGGAATCGAA
GTTTAAGGAAACAGGTGTCATAACACCAGAAGAGTTTGTGGCAGCTGGAGATCATTTAGTCCACCACTGTCCCACATGGC
AATGGGCAACAGGGGAAGAATTAAAAGTGAAGGCATACCTACCAACAGGCAAACAATTTTTGGTAACCAAAAATGTGCCA
TGCTACAAACGGTGCAAACAGATGGAATATTCAGATGAATTGGAAGCTATCATAGAAGAAGATGATGGTGATGGAGGATG
GGTAGATACATATCACAACACAGGTATTACAGGAATAACTGAAGCAGTTAAGGAAATTACACTGGAAAACAAGGACAGTA
TAAAACTCCAGGATTGTTCAGCACTATGTGAAGAGGAAGAAGAGGAAGATGAAGGGGAAGCTGCTGATATGGAAGAATAT
GAAGAGAGTGGATTGTTGGAAACAGATGAGGCTACTCTAGACACAAGAAAACTCGTAGAAGCTTGTAAAGCTAAAGCTGA
TGCTGGAGGTGAAGATGCTATTTTGCAAACCAGAACTTATGACCTTTACATCACTTATGATAAATATTATCAGACACCCC
GGCTATGGCTGTTTGGCTATGATGAGCAACGGCAGCCTTTAACAGTTGAACACATGTATGAAGATATTAGTCAAGATCAT
GTGAAGAAAACAGTGACTATTGAAAATCACCCTCATCTCCCACCACCTCCTATGTGTTCAGTTCATCCATGCAGGCATGC
TGAGGTGATGAAGAAAATCATTGAGACTGTTGCAGAAGGAGGGGGAGAACTTGGTGTTCATATGTATCTTCTAATTTTTC
TGAAATTTGTACAAGCTGTCATTCCAACAATAGAATATGACTACACAAGACACTTCACCATGTAA

Library Parental gene expression (RPM)
SRP017611_liver 14 .49 RPM
SRP017611_kidney 31 .22 RPM
SRP017611_brain 33 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018116 ortholog_many2many 1 retrogene
retro_amel_645,
Callithrix jacchus ENSCJAG00000020358 ortholog_one2many 1 retrogene
retro_cjac_2756,
Equus caballus ENSECAG00000011954 ortholog_one2many 1 retrogene
retro_ecab_594,
Homo sapiens ENSG00000144848 ortholog_one2many 1 retrogene
retro_hsap_2479,
Gorilla gorilla ENSGGOG00000006637 ortholog_one2many 1 retrogene
retro_ggor_1544,
Myotis lucifugus ENSMLUG00000001573 ortholog_one2many 1 retrogene
retro_mluc_1025,
Macaca mulatta ENSMMUG00000014232 ortholog_one2many 1 retrogene
retro_mmul_594,
Mustela putorius furo ENSMPUG00000000321 ortholog_many2many 2 retrogenes
retro_mputfur_1064, retro_mputfur_1614,
Nomascus leucogenys ENSNLEG00000004302 ortholog_one2many 2 retrogenes
retro_nleu_268, retro_nleu_331,
Pongo abelii ENSPPYG00000013548 ortholog_one2many 1 retrogene
retro_pabe_1827,
Pan troglodytes ENSPTRG00000015220 ortholog_one2many 1 retrogene
retro_ptro_1434,
Pteropus vampyrus ENSPVAG00000009568 ortholog_one2many 1 retrogene
retro_pvam_1399,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1219 55.33 61.78
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Download FASTA sequences of all ENSOCUG00000015651 retrocopies