Parental gene: | PDZK1, ENSOCUG00000024935 |
| Aliases: | None |
| Description: | PDZ domain containing 1 (PDZK1), mRNA [Source:RefSeq mRNA;Acc:NM_001082151] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:43032247..43072442(+) |
>ENSOCUG00000024935
ATGGCCTCCACCTTCAACCCCCGAGAATGCAAACTGTCCAAAGAAGAAGGGCAAAACTATGGCTTCTTCCTGCGAATCGA
GAAAGACACGGAGGGCCACCTGGTCCGGGTGATTGAGAAGGGCAGCCCTGCGGAGAAGGCCGGCCTGCAGGATGGAGACC
GCGTTCTCAGGATCAACGGGGTCTTCGTGGACAAGGAAGAGCATATGCAGGTGGTGGATCTGGTGAGAAAGAGTGGCAAT
GCAGTGACTTTACTAGTTCTGGATGGGAATTCCTATGAGAAAGCTGTGAAAAAACAGGTAGATTTGAAAGAGTTGGGTCA
GAGTCGGCAGGAGGCGGATTTGCGTGACGAGAACGTGGCCCCTGTGATGAATGGAGGAGTGGAGACCTGGACGCAGCCGC
GACTCTGCTACCTGGTGAAGCAGGGGAACAGCTACGGCTTCTCCCTGAAAACCGTCCAAGGTAAAAAGGGCGTGTACATG
ACTGATATCATCCCTCAAAGCGTGGCTATGAAGGCTGGCGTCCTGGCTGATGACCACTTGATTGAAGTGAATGGAGAGAA
TGTAGAAGATGCCAGTCACGAGGAGGTGGTTGAAAAGGTGAAGAAGTCGGGAAACCGTATCGTGTTCCTTCTGGTGGACA
AAGAAACTGAGAAACGGCACAGCGAGCAGAAGATAGAGTTCAGGAGAGAAGCGGCCAGTTTGAAGCTGCTGCCCCACCAG
CCCCGCATTGTGGAGATGAGGAAGGGAAGCAGTGGCTATGGTTTCTATCTGAAGGCAGGCCCAGAACAGAGAGGGGGGAG
GGTAGGCCAAATCATCAAGGACATAGATTCTGGAAGTCCAGCAGAGGCGGCTGGCTTGAAGAACAATGACCTGGTAATTG
CTGTCAACGGCAAGTCTGTGGAAGCCCTTGATCATGACGGTGTGGTGGAGCTGATTAAAAAGGGTGGAGATCAGACTTCA
CTGTTGGTGGTGGACAAAGAGGCGGACAGCATGTATAGACTGGCTCATTTTTCTCCATTTCTCTACTATCAAAGTCAAGA
ACTGCCTAATGGTTCAGTCACGGAGGTTGCAGCTCCTACCCCTGTTCCTCCGGAGGTCTCAAGTCCAGATCCTACAGAGG
AAGTAGAAGATCATAAGCCTAAACTCTGCAGGCTGGATAAAGGGGAAAATGGCTATGGCTTTCACTTAAATGCGATCCGG
GGCCTGCCAGGCTCATTCGTCAAAGAGGTACAGAAGGGCAGCCCTGCTGACTTGGCTGGGTTGGAGGATGAGGATATCAT
CATCGAAGTAAATGGGGTGAATGTGCTGGATGAACCCTATGAGAAGGTGGTGGACAGAATCCAAAGCAGTGGGGACAATG
TCACATTATTAGTCTGTGGAAAGAAGGCCTACGAATATTTCCAAGCTAAGAAAATCCCTATTGTTTCCTCCATGGCTCTT
CCATTGGCTATACCTCCAGATTCTCAAGGAGTGTTGGCGGAATTGGAATACAACTTGCACGAGGCAAAAGAACGAGCGCA
CAGTACAGCTTCAAATTCTTCTTCCAATTCTGAAGATACCGAGCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 22 .30 RPM |
| SRP017611_kidney | 532 .22 RPM |
| SRP017611_liver | 99 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011153 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000000375 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000028785 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_133 | 97.08 | 98.47 | Please wait, loading  |
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Download FASTA sequences of all ENSOCUG00000024935 retrocopies