Parental gene:

NUP50, ENSOGAG00000002320

Aliases:None
Description:nucleoporin 50kDa [Source:HGNC Symbol;Acc:8065]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873526.1:4143517..4157888(-)


>ENSOGAG00000002320
ATGGCCAAAAGAATTGCTGAGAAGGAATTGACAGATAGGAACTGGGATCAAGAAGATGAAGCTGAAGAGGTAGGAACATT
CTCAGTGGCCAGTGAGGAAGTCTTGAAGAATAGAGCCATAAAGAAAGCAAAGCGGAGAAATGTTGGATTTGAATCTGATA
GTGGAGGAGCCTTTAAAGGTTTTAAAGGTTTGGTTGTACCTTCTGGAGGAGGAGGGTTTTCTGGATTTGGTGGTGGTGCT
GGAGGGAAGCCTCTGGAAGGACTGTCAAATGGAAACAGCATGGCTAGCACCCCTCCCATCCCCAGTGCAAAGGCAGTAAC
AGAGACCAAGGCAGCCTTGGAGTCTGTTACTGCAAATGGCCCTACCATGTTGGTTGATAAAAAGATTTCAAATCCCAGAA
CTAATGGCGATAGTCAGCAGCCCTCCTCCTCTGGCCTGGCCTCTAGTAAAGCCTATGTCAGGAATGCCTATAACAACCAG
CTGGCTGCCTTGAACTGCTCCGTCCGGGACTGGATCGCGAAGCATGTGAACGTGAACCCGCTCTGCGACCTGACACCCAT
CTTTAAAGACTACGAGAAATACTTAGCGAGTATCGAGCAGCAGCACGGGAGCAGCGCCAGTGGTACTGCTCAGAGCGAAG
CTAACAAGACCGTGGTCGACGTGCAGTCTCCTTCCCCGCTCGGCTCAGCAAAACTCCAGAAAGAGTCAGAGTTTTTGTTC
CACGGCAACAAAACTGAAGATACACCTGAAAAGAAGACTGAGGCTACTTCTGAGAAGAAGACGGACCCATCACTAGGAGC
AACAAGTGCCTCATTTAATTTTGGCAAGAAAATTGATAGCTCTGTTTTGGGCTCATTAAGCTCTGGCCCCCTGGCTGGAT
TTTCATTTTCCTCTGGAAATGCCCCTTTATTTGGCAAAGATACTTCCCAGAGTAAACTAGGTTCTTCACCACTTCCCACT
AAGACACTGGTGAGCCAGGCAGAAGGTGGAGGCAACGAGTGCAAAGAAGGTGGAGATGAAGAAGAGAATGATGAGCCACC
CAAAGTAGTAGTTACTGAAGTAAAAGAAGAAGATGCTTTTTACTCCAAAAAGTGTAAACTATTTTACAAGAAAGACAATG
AATTTAAAGAGAAAGGTGTAGGTACTCTGCATTTAAAACCTACAGCAAACCAGAAGACACAGCTTTTGGTCCGGGCAGAC
ACCAATTTAGGCAACATTTTGCTGAATGTTCTGATTCCACCCAATATGCCATGTACCCGAACAGGAAAAAATAACGTACT
TATTGTCTGTGTTCCAAATCCACCAATTGATGAGAAGAACGCCAGTGTCCCAGTTACCATGTTAATCAGGGTAAAAACCA
GCGAGGACGCAGACGAGTTGCACAAAATTCTACTGGAGAAAAAGGATGCCTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016242 ortholog_one2many 1 retrogene
retro_cjac_4080,
Homo sapiens ENSG00000093000 ortholog_one2one 3 retrogenes
retro_hsap_1429, retro_hsap_3301, retro_hsap_3434,
Microcebus murinus ENSMICG00000006840 ortholog_one2one 1 retrogene
retro_mmur_534,
Mus musculus ENSMUSG00000016619 ortholog_one2many 1 retrogene
retro_mmus_1905,
Nomascus leucogenys ENSNLEG00000013154 ortholog_one2one 2 retrogenes
retro_nleu_1359, retro_nleu_1844,
Pongo abelii ENSPPYG00000011928 ortholog_one2one 1 retrogene
retro_pabe_2723,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_942 60.71 75.96
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Download FASTA sequences of all ENSOGAG00000002320 retrocopies