Parental gene: | RBBP4, ENSOGAG00000011632 |
| Aliases: | None |
| Description: | retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873723.1:497460..519707(+) |
>ENSOGAG00000011632
ATGGCCGACAAGGAAGCAGCCTTTGACGACGCTGTGGAAGAACGTGTAATCAACGAGGAATACAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTAACTGCACAGTGGCTTCCAGATGTAA
CCAGCAGACCCCGGCCAGGCTCGAACCCACCAGCTTTGGTGTATGTGGCCGGCACCCTACTCACTGAGCTACAGAATTAT
GTCATGGTATTTTCCTTAAAGAATCCGCCACCCCATACCTACCATTCTGGAACCCATGAAGATAGCCAGCAGAGAGAATT
TGGAGGTTTCGGTTCTGTTAGTGGGAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGGGCCCGTT
ATATGCCCCAGAACCCTTGCATCATTGCAACAAAGACTCCATCCAGTGATGTTCTTGTTTTTGACTATACAAAACATCCT
TCTAAACCAGACCCTTCTGGAGAGTGCAACCCAGACTTACGTCTCCGTGGACATCAGAAGGAAGGCTATGGACTTTCTTG
GAACCCAAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGATCATACCATCTGCCTGTGGGACATCAGTGCTGTTCCAA
AGGAAGGGAAAGTGGTGGACGCAAAGACCATCTTTACAGGGCATACAGCAGTAGTTGAAGATGTTTCCTGGCACTTGCTC
CATGAGTCTTTGTTTGGATCAGTTGCTGATGATCAGAAACTTATGATTTGGGATACTCGTTCAAACAATACTTCCAAACC
AAGCCATTCAGTTGATGCTCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAGTTCATTCTTGCCACAG
GATCAGCTGACAAGACCGTTGCCTTGTGGGATCTACGAAATCTGAAGCTTAAGTTGCATTCCTTTGAATCACATAAGGAT
GAAATATTCCAGGTTCAGTGGTCGCCTCACAATGAGACTATTTTGGCTTCTAGTGGTACTGATCGCAGACTGAATGTCTG
GGACTTAAGTAAAATTGGAGAGGAACAATCCCCAGAAGATGCAGAAGATGGGCCTCCTGAGTTGTTGTTTATTCATGGTG
GTCACACTGCCAAGATATCTGATTTCTCTTGGAATCCTAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATC
ATGCAAGTGTGGCAGATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGCGTGGATCCAGAAGGACAAGGGTC
CTAG
ATGGCCGACAAGGAAGCAGCCTTTGACGACGCTGTGGAAGAACGTGTAATCAACGAGGAATACAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTAACTGCACAGTGGCTTCCAGATGTAA
CCAGCAGACCCCGGCCAGGCTCGAACCCACCAGCTTTGGTGTATGTGGCCGGCACCCTACTCACTGAGCTACAGAATTAT
GTCATGGTATTTTCCTTAAAGAATCCGCCACCCCATACCTACCATTCTGGAACCCATGAAGATAGCCAGCAGAGAGAATT
TGGAGGTTTCGGTTCTGTTAGTGGGAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGGGCCCGTT
ATATGCCCCAGAACCCTTGCATCATTGCAACAAAGACTCCATCCAGTGATGTTCTTGTTTTTGACTATACAAAACATCCT
TCTAAACCAGACCCTTCTGGAGAGTGCAACCCAGACTTACGTCTCCGTGGACATCAGAAGGAAGGCTATGGACTTTCTTG
GAACCCAAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGATCATACCATCTGCCTGTGGGACATCAGTGCTGTTCCAA
AGGAAGGGAAAGTGGTGGACGCAAAGACCATCTTTACAGGGCATACAGCAGTAGTTGAAGATGTTTCCTGGCACTTGCTC
CATGAGTCTTTGTTTGGATCAGTTGCTGATGATCAGAAACTTATGATTTGGGATACTCGTTCAAACAATACTTCCAAACC
AAGCCATTCAGTTGATGCTCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAGTTCATTCTTGCCACAG
GATCAGCTGACAAGACCGTTGCCTTGTGGGATCTACGAAATCTGAAGCTTAAGTTGCATTCCTTTGAATCACATAAGGAT
GAAATATTCCAGGTTCAGTGGTCGCCTCACAATGAGACTATTTTGGCTTCTAGTGGTACTGATCGCAGACTGAATGTCTG
GGACTTAAGTAAAATTGGAGAGGAACAATCCCCAGAAGATGCAGAAGATGGGCCTCCTGAGTTGTTGTTTATTCATGGTG
GTCACACTGCCAAGATATCTGATTTCTCTTGGAATCCTAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATC
ATGCAAGTGTGGCAGATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGCGTGGATCCAGAAGGACAAGGGTC
CTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001021 | possible_ortholog | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000015352 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011313 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000009940 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015214 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014995 | within_species_paralog | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021492 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010923 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002236 | ortholog_one2one | 3 retrogenes | |
| Vicugna pacos | ENSVPAG00000011876 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_3079 | 87.76 | 66.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_3297 | 79.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000011632 retrocopies