Parental gene:

UBA52, ENSOGAG00000028000

Aliases:None
Description:ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873624.1:3768124..3769577(+)


>ENSOGAG00000028000
ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATTACCCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAA
AGCCAAAATCCAAGATAAGGAGGGCATTCCACCTGACCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAAGATGGCC
GCACTCTTTCAGATTACAACATCCAGAAAGAGTCTACCCTGCACCTGGTGCTTCGTCTGAGAGGTGGCATCATTGAGCCG
TCCCTCCGCCAGCTTGCCCAGAAGTACAACTGCGACAAGATGATCTGCCGCAAATGTTATGCTCGCCTGCACCCCCGTGC
TGTCAACTGCCGCAAGAAGAAGTGTGGCCACACCAACAATCTGCGCCCCAAGAAGAAGGTCAAATAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014723 ortholog_one2one 8 retrogenes
retro_cfam_1671, retro_cfam_1725, retro_cfam_1879, retro_cfam_1933, retro_cfam_2205, retro_cfam_600, retro_cfam_654, retro_cfam_873,
Latimeria chalumnae ENSLACG00000008132 ortholog_one2many 1 retrogene
retro_lcha_11,
Microcebus murinus ENSMICG00000017583 ortholog_one2one 5 retrogenes
retro_mmur_143, retro_mmur_1486, retro_mmur_150, retro_mmur_633, retro_mmur_708,
Myotis lucifugus ENSMLUG00000029594 possible_ortholog 5 retrogenes
retro_mluc_1995, retro_mluc_2057, retro_mluc_2203, retro_mluc_44, retro_mluc_829,
Macaca mulatta ENSMMUG00000016085 possible_ortholog 7 retrogenes
retro_mmul_1184, retro_mmul_1580, retro_mmul_1625, retro_mmul_2183, retro_mmul_2311, retro_mmul_232, retro_mmul_896,
Monodelphis domestica ENSMODG00000003499 ortholog_one2one 1 retrogene
retro_mdom_867,
Mustela putorius furo ENSMPUG00000015527 ortholog_one2one 8 retrogenes
retro_mputfur_1059, retro_mputfur_1119, retro_mputfur_1126, retro_mputfur_382, retro_mputfur_516, retro_mputfur_713, retro_mputfur_78, retro_mputfur_945,
Mus musculus ENSMUSG00000090137 possible_ortholog 3 retrogenes
retro_mmus_101, retro_mmus_129, retro_mmus_31,
Pongo abelii ENSPPYG00000009746 possible_ortholog 2 retrogenes
retro_pabe_111, retro_pabe_3291,
Sus scrofa ENSSSCG00000013907 ortholog_one2one 1 retrogene
retro_sscr_988,
Ictidomys tridecemlineatus ENSSTOG00000004678 ortholog_one2one 1 retrogene
retro_itri_49,
Tursiops truncatus ENSTTRG00000021461 ortholog_one2one 1 retrogene
retro_ttru_1582,
Xiphophorus maculatus ENSXMAG00000003911 ortholog_one2one 1 retrogene
retro_xmac_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1345 77.89 73.44
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2. retro_ogar_1419 66.41 97.66
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3. retro_ogar_1583 73.39 84.38
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4. retro_ogar_1604 71.21 100.00
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5. retro_ogar_1792 76.99 88.28
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6. retro_ogar_2026 83.81 82.03
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7. retro_ogar_2370 93.98 64.84
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8. retro_ogar_2485 76.56 97.66
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9. retro_ogar_2544 62.24 73.44
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10. retro_ogar_3337 60.00 100.00
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Download FASTA sequences of all ENSOGAG00000028000 retrocopies