Parental gene: | CKAP2L, ENSOPRG00000012796 |
| Aliases: | None |
| Description: | cytoskeleton associated protein 2-like [Source:HGNC Symbol;Acc:26877] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_4797:436282..458464(-) |
>ENSOPRG00000012796
AAGATGGGGCCGGGGCGCGGCGCCGCCTCGGCTGCGGCGGAAGAGCGACAGAGAAAGCTCCAGGAGTACCTAGCAGCCAA
GGGAAAACTGAAGCCGGAGAACACCAAGCCTTACCTAAAAGCCAAGAATAATATCCCAAATCCACCAGCTTCCAAATCAG
CTATTAGACCCGGAAAGAATGTTACCAGCCACGTTGCTTTGCCTGTGAAAACATCAAGGCCCATGAGCATTAAAGTACAG
CCCAGACCAGACAATATCACAAGGTCTCAGAAGCCAAAGTTGGAGGCACCCAAACAACCGGGCAAAAGACCAATATCAGG
ATGCTTTTCTTCTAACCCAACCTGTAAGCCTTCCAGCAAGAATCAGCAGCAACATGTTGCTAGACCATTTACTACAGGAG
AACTATCTAGAAAACTGGAAGGATCCCTTAGTATACAGCAATTAGAAACTAAAGAGCAGCCAGTTACAGGTCAAGGGCAT
GCTAAATGTACAGACTCTACAGACAACACCCATGTTGAGAAGGAATCTTCAGATAACTTTCTGAAGGAGGGGAACAAAGA
GAACTTACCACAAACTTTACGAGAATCTCAGAGAAAACCAGCTCCTGAGTTATGTATTGTAAGTAAGGCAAAAACCGGCT
TGTATAATCAACCCAAGAGCAATTACGCTCCTAGAAAGGCTTTGGGCTCCAGTTCAGTGACTAGCACTGTTCTGAAAGAC
AGAGCTAACAAACAGATTGGAGGGACACAAACCAAGACTGTTCCAGTGAAGTCACAACAGCTCCCCAGGGGAGATCTTGT
AAGGCCAGGAGGAAAACCCCCAAGGACAATTCCCTCTCACTCTGTAACAATCCAAGCATCCAGGAAGCCAGAGGTCAAGG
ATACCAAGGTTGACAGGAGTAACCCTGAAAGACCAACTGAAGCTAAGTTACAGTCATGTCATGTTACTGAACAGAAAGCA
AAACCTATGAAACCCAGAACATACCCCAGTTTGGTTCAGGGAGGACTTAACAACAGACATCCAAACATCAAACAAGAGCA
GAAGTCCACACAACCTGGTATTAGACCCCAGATATCATGTATACTGCCAAAAACAAAAACCGTCAACCAGAAGCCTGGCC
TGACCATTCGCAACTTAAGTTCGGTTGTTCCAAGCACCCCCGGCTTGAGAGTAAATAGAGCCAACAGCAACAGCGTTCAA
CAGAAAGCACAGACTTTGGACTCCAAGTTGAAAAGGACTCTTCCCCTCAACCCTTTCCTGAGCAAGACAGCTCCCAAACC
TTCCACCGCAATCACAACCGCAAATGGGGCCCAGACCAACCCCAATATTAAAACGAAGACAACAGCAGAGGATCGAAGAA
AACAACTGGAAGAATGGCAGAAATCCAAGGGAAAGGTCTATAAGCGACCTCCTATGGAAATCAAAGCAAAAAGAAAAGTA
ATAGAGGAAATGAACATTTCTTTCTGGAAGAGCATTGAAAAAGAAGAGGAAGAAAAGAAAGCTCAACTGGAGCTGTCTAG
TAAGATTAACAAAACTCTGACGGAATGCCTGCAGCTCATTGAAGAGGGTATGATTTCTGATGAAATACTCGCCATCATGT
CTAGCATTCCTGAGGCTGAAAAATTTGCTAAATTCTGGATCTGCAAAGCTAAGCTGTTGGCAAGTAAAGGTCCTTTTGAT
GTGATTGGGTTATACGAAGAGGCCATTAAAAGTGGGGCAACACCTATACAAGACCTGCGAAAAGTCGTTCTTAATATTTT
GCAAGACTCAAAAAGAACTACGGAAGGAGTGACCTCTGACCCTTCAGGCACTGAAAGTGACACAGCGTCAGTAGAAGTGC
TGGCCAACATCGTGGAATCAGGACAAGCTTGTCTTCCTCCCAAAGAGAAAGAGCAGCTTGCAGCAACACCCCACGTCTCC
ATGGCCGAACAGGATAGTCATCCTGGGATCAAGTTACAGGTTGCCCCAATTCCCAGAATAAGTGGAGTGGCGGAAGTGCA
AGATATGAAGCTCATCACCCCCGTGCGACGCTCAGCCAGGATCGAGCGAGCAGTGTCCCGCTACCCGGAGATGCTGCAGG
ACCACGACTTGGTGGTGGCGTCTCTCGACGAGCTCTTGGAAGTGGAAGAAACCGAGTACTTTATATTCCGTAAAAATGAG
GCCTTGCCTGTAACATTAGGGTTTCCAGTTCTTGAATCATAA
AAGATGGGGCCGGGGCGCGGCGCCGCCTCGGCTGCGGCGGAAGAGCGACAGAGAAAGCTCCAGGAGTACCTAGCAGCCAA
GGGAAAACTGAAGCCGGAGAACACCAAGCCTTACCTAAAAGCCAAGAATAATATCCCAAATCCACCAGCTTCCAAATCAG
CTATTAGACCCGGAAAGAATGTTACCAGCCACGTTGCTTTGCCTGTGAAAACATCAAGGCCCATGAGCATTAAAGTACAG
CCCAGACCAGACAATATCACAAGGTCTCAGAAGCCAAAGTTGGAGGCACCCAAACAACCGGGCAAAAGACCAATATCAGG
ATGCTTTTCTTCTAACCCAACCTGTAAGCCTTCCAGCAAGAATCAGCAGCAACATGTTGCTAGACCATTTACTACAGGAG
AACTATCTAGAAAACTGGAAGGATCCCTTAGTATACAGCAATTAGAAACTAAAGAGCAGCCAGTTACAGGTCAAGGGCAT
GCTAAATGTACAGACTCTACAGACAACACCCATGTTGAGAAGGAATCTTCAGATAACTTTCTGAAGGAGGGGAACAAAGA
GAACTTACCACAAACTTTACGAGAATCTCAGAGAAAACCAGCTCCTGAGTTATGTATTGTAAGTAAGGCAAAAACCGGCT
TGTATAATCAACCCAAGAGCAATTACGCTCCTAGAAAGGCTTTGGGCTCCAGTTCAGTGACTAGCACTGTTCTGAAAGAC
AGAGCTAACAAACAGATTGGAGGGACACAAACCAAGACTGTTCCAGTGAAGTCACAACAGCTCCCCAGGGGAGATCTTGT
AAGGCCAGGAGGAAAACCCCCAAGGACAATTCCCTCTCACTCTGTAACAATCCAAGCATCCAGGAAGCCAGAGGTCAAGG
ATACCAAGGTTGACAGGAGTAACCCTGAAAGACCAACTGAAGCTAAGTTACAGTCATGTCATGTTACTGAACAGAAAGCA
AAACCTATGAAACCCAGAACATACCCCAGTTTGGTTCAGGGAGGACTTAACAACAGACATCCAAACATCAAACAAGAGCA
GAAGTCCACACAACCTGGTATTAGACCCCAGATATCATGTATACTGCCAAAAACAAAAACCGTCAACCAGAAGCCTGGCC
TGACCATTCGCAACTTAAGTTCGGTTGTTCCAAGCACCCCCGGCTTGAGAGTAAATAGAGCCAACAGCAACAGCGTTCAA
CAGAAAGCACAGACTTTGGACTCCAAGTTGAAAAGGACTCTTCCCCTCAACCCTTTCCTGAGCAAGACAGCTCCCAAACC
TTCCACCGCAATCACAACCGCAAATGGGGCCCAGACCAACCCCAATATTAAAACGAAGACAACAGCAGAGGATCGAAGAA
AACAACTGGAAGAATGGCAGAAATCCAAGGGAAAGGTCTATAAGCGACCTCCTATGGAAATCAAAGCAAAAAGAAAAGTA
ATAGAGGAAATGAACATTTCTTTCTGGAAGAGCATTGAAAAAGAAGAGGAAGAAAAGAAAGCTCAACTGGAGCTGTCTAG
TAAGATTAACAAAACTCTGACGGAATGCCTGCAGCTCATTGAAGAGGGTATGATTTCTGATGAAATACTCGCCATCATGT
CTAGCATTCCTGAGGCTGAAAAATTTGCTAAATTCTGGATCTGCAAAGCTAAGCTGTTGGCAAGTAAAGGTCCTTTTGAT
GTGATTGGGTTATACGAAGAGGCCATTAAAAGTGGGGCAACACCTATACAAGACCTGCGAAAAGTCGTTCTTAATATTTT
GCAAGACTCAAAAAGAACTACGGAAGGAGTGACCTCTGACCCTTCAGGCACTGAAAGTGACACAGCGTCAGTAGAAGTGC
TGGCCAACATCGTGGAATCAGGACAAGCTTGTCTTCCTCCCAAAGAGAAAGAGCAGCTTGCAGCAACACCCCACGTCTCC
ATGGCCGAACAGGATAGTCATCCTGGGATCAAGTTACAGGTTGCCCCAATTCCCAGAATAAGTGGAGTGGCGGAAGTGCA
AGATATGAAGCTCATCACCCCCGTGCGACGCTCAGCCAGGATCGAGCGAGCAGTGTCCCGCTACCCGGAGATGCTGCAGG
ACCACGACTTGGTGGTGGCGTCTCTCGACGAGCTCTTGGAAGTGGAAGAAACCGAGTACTTTATATTCCGTAAAAATGAG
GCCTTGCCTGTAACATTAGGGTTTCCAGTTCTTGAATCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000007242 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010435 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000028904 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009729 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013625 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_904 | 88.64 | 72.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000012796 retrocopies