Parental gene: | RDH13, ENSOPRG00000015998 |
| Aliases: | None |
| Description: | retinol dehydrogenase 13 (all-trans/9-cis) [Source:HGNC Symbol;Acc:19978] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_45826:124..7117(-) |
>ENSOPRG00000015998
ATGAGCCGCTACATGCTGCCGCTGTCGGTGCTGGGCACGGCGGTGGGCGGCGCCGCGCTGCTCAAGGACTATGTGGCTGG
CGGAGCGTGCCCCAGCAAGGCCACCATCCCCGGGAAGACGGTGATCGTGACGGGCGCCAACACTGGCATCGGGAAGCAGA
CGGCCCTGGAGCTGGCCAGAAGAGGAGGCAGGGTCATCCTGGCATGTCGGGACAAGGACAAGTGTGAGGCAGCGGCCAAG
GACATCCGTGGGGAGACCCTCAACCACCGCGTCAGCGCCCGCCACCTGGACCTGGCTTCCCTCAAGTCTGTCCGCGAGTT
TGCTGCGAGGGTCGTGGAAGAGGAGGAGCGAGTGGACATTCTCATCAACAACGCTGCTGTGATGCGCTGCCCACACTGGA
CCACTGAGGATGGCTTTGAGATGCAGTTTGGGGTCAACCACCTGGGTCACTTCCTCCTGACCAATTTGCTGCTGGACAAG
CTGAAGGCCTCGGCCCCCTCGCGGATCATCAACCTCTCATCCCTGGCCCATGTGGCTGGCCACATTGACTTTGATGACCT
GAACTGGCAGGCACGGAGGTATGACACCAAAGCTGCCTACTGTCAGAGCAAGCTGGCTGTGGTCCTCTTCACCAAGGAAT
TGAGCCGCCGGCTGCAAGGCACAGGTGTGACCGCCAACGCCCTGCATCCTGGCGTGGCCCGGACAGAGCTGGGCCGACAC
ACAGGCATGCACAGCTCCGCCTTCTCCAGCCTCACACTCGGGCCCATCTTCTGGCTGCTGGTCAAGAGCCCCCAGCTGGC
GGCCCAACCCAGCACGTACCTAGCGGTGGCGGAGGAACTCGAGGGAGTTTCTGGAAAGTACTTCGATGGACTTCGAGAGA
AGGCTGCAGCCCCGGAGGCGGAGGATGAGGAGGTGGCCCGGAGGCTCTGGGCTGAGAGTGCTCGTCTGGTGGGCTTGGAG
GCACCTGGTGAATCCTTGGTGAGGGGACAGTCCACCACCAAGTAA
ATGAGCCGCTACATGCTGCCGCTGTCGGTGCTGGGCACGGCGGTGGGCGGCGCCGCGCTGCTCAAGGACTATGTGGCTGG
CGGAGCGTGCCCCAGCAAGGCCACCATCCCCGGGAAGACGGTGATCGTGACGGGCGCCAACACTGGCATCGGGAAGCAGA
CGGCCCTGGAGCTGGCCAGAAGAGGAGGCAGGGTCATCCTGGCATGTCGGGACAAGGACAAGTGTGAGGCAGCGGCCAAG
GACATCCGTGGGGAGACCCTCAACCACCGCGTCAGCGCCCGCCACCTGGACCTGGCTTCCCTCAAGTCTGTCCGCGAGTT
TGCTGCGAGGGTCGTGGAAGAGGAGGAGCGAGTGGACATTCTCATCAACAACGCTGCTGTGATGCGCTGCCCACACTGGA
CCACTGAGGATGGCTTTGAGATGCAGTTTGGGGTCAACCACCTGGGTCACTTCCTCCTGACCAATTTGCTGCTGGACAAG
CTGAAGGCCTCGGCCCCCTCGCGGATCATCAACCTCTCATCCCTGGCCCATGTGGCTGGCCACATTGACTTTGATGACCT
GAACTGGCAGGCACGGAGGTATGACACCAAAGCTGCCTACTGTCAGAGCAAGCTGGCTGTGGTCCTCTTCACCAAGGAAT
TGAGCCGCCGGCTGCAAGGCACAGGTGTGACCGCCAACGCCCTGCATCCTGGCGTGGCCCGGACAGAGCTGGGCCGACAC
ACAGGCATGCACAGCTCCGCCTTCTCCAGCCTCACACTCGGGCCCATCTTCTGGCTGCTGGTCAAGAGCCCCCAGCTGGC
GGCCCAACCCAGCACGTACCTAGCGGTGGCGGAGGAACTCGAGGGAGTTTCTGGAAAGTACTTCGATGGACTTCGAGAGA
AGGCTGCAGCCCCGGAGGCGGAGGATGAGGAGGTGGCCCGGAGGCTCTGGGCTGAGAGTGCTCGTCTGGTGGGCTTGGAG
GCACCTGGTGAATCCTTGGTGAGGGGACAGTCCACCACCAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003306 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000023146 | ortholog_one2one | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000009095 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010398 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011484 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000003600 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016531 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0033203 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_286 | 56.31 | 61.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_524 | 56.31 | 61.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000015998 retrocopies