Parental gene:

COX20, ENSPPYG00000000053

Aliases:None
Description:COX20 cytochrome C oxidase assembly factor [Source:HGNC Symbol;Acc:26970]
Organism:Orangutan (Pongo abelii)
Coordinates:1:4290077..4300349(-)


>ENSPPYG00000000053
ATGGCCGCCGCGCCGGAGCCCGGTGAACCCAAGGAGAGGAAGTCCCTTAAGCTCCTAGGATTTTTAGATGTTGAAAATAC
TCCCTGCGCCCGGCATTCAATATTGTATGGTTCATTAGGATCTGTTGTGGCTGGCTTTGGACATTTTTTGTTCACTAGTA
GAATTAGAAGATCATGTGATGTTGGAGTAGGAGGGTTTATCTTGGTGACTTTGGGATGCTGGTTTCATTGTAGGTATAAT
TATGCAAAGCAAAGAATCCAGGAAAGAATTGCCAGAGAAGAAATTAAAAAGAAGATACTATATGAAGGTACCCACCTCGA
TCCTGAAAGAAAACACAACGGCAGCAGCAGCAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .74 RPM
SRP007412_cerebellum 43 .90 RPM
SRP007412_heart 25 .83 RPM
SRP007412_kidney 37 .89 RPM
SRP007412_liver 22 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001381 ortholog_one2one 4 retrogenes
retro_chof_1820, retro_chof_207, retro_chof_299, retro_chof_825,
Erinaceus europaeus ENSEEUG00000012147 ortholog_one2one 1 retrogene
retro_eeur_104,
Homo sapiens ENSG00000203667 ortholog_one2one 1 retrogene
retro_hsap_587,
Myotis lucifugus ENSMLUG00000026132 ortholog_one2one 7 retrogenes
retro_mluc_1273, retro_mluc_1505, retro_mluc_1863, retro_mluc_1954, retro_mluc_2343, retro_mluc_792, retro_mluc_958,
Monodelphis domestica ENSMODG00000024669 ortholog_one2one 1 retrogene
retro_mdom_2014,
Mus musculus ENSMUSG00000026500 ortholog_one2one 1 retrogene
retro_mmus_2957,
Nomascus leucogenys ENSNLEG00000004027 ortholog_one2one 1 retrogene
retro_nleu_2518,
Ochotona princeps ENSOPRG00000004534 ortholog_one2one 6 retrogenes
retro_opri_1072, retro_opri_287, retro_opri_31, retro_opri_585, retro_opri_676, retro_opri_720,
Pteropus vampyrus ENSPVAG00000002577 ortholog_one2one 1 retrogene
retro_pvam_945,
Rattus norvegicus ENSRNOG00000004553 ortholog_one2one 2 retrogenes
retro_rnor_1033, retro_rnor_2184,
Sorex araneus ENSSARG00000004625 ortholog_one2one 2 retrogenes
retro_sara_167, retro_sara_470,
Tupaia belangeri ENSTBEG00000015272 ortholog_one2one 4 retrogenes
retro_tbel_1186, retro_tbel_3207, retro_tbel_3838, retro_tbel_3926,
Tarsius syrichta ENSTSYG00000005644 ortholog_one2one 1 retrogene
retro_tsyr_100,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2090 75.83 100.00
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Download FASTA sequences of all ENSPPYG00000000053 retrocopies