Parental gene:

RAB4A, ENSPPYG00000000128

Aliases:None
Description:RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:9781]
Organism:Orangutan (Pongo abelii)
Coordinates:1:20377606..20408812(-)


>ENSPPYG00000000128
ATGTCGCAGACGGCCATGTCCGAAACCTACGATTTTTTGTTTAAGTTCTTGGTTATTGGAAATGCAGGAACTGGCAAATC
TTGCTTACTTCATCAGTTTATTGAAAAAAAATTCAAAGATGACTCAAATCATACAATAGGAGTGGAATTTGGTTCAAAGA
TAATAAATGTTGGTGGTAAATATGTAAAGTTACAAATATGGGATACAGCAGGACAAGAACGATTCAGGTCCGTGACGAGA
AGTTATTACCGAGGCGCGGCCGGGGCTCTCCTTGTCTATGATATCACCAGCCGAGAAACCTACAATGCGCTTACTAATTG
GTTAACAGATGCCCGAATGCTAGCGAGTCAGAACATTGTGATCATCCTTTGTGGAAACAAGAAGGACCTGGATGCAGATC
GTGAAGTTACCTTCTTAGAAGCCTCCAGATTTGCTCAAGAAAATGAGCTGATGTTTTTGGAAACAAGTGCGCTAACAGGG
GAGAATGTAGAAGAGGCTTTTGTACAGTGTGCAAGAAAAATACTTAACAAAATCGAATCAGGTGAGCTGGACCCAGAAAG
AATGGGCTCAGGTATTCAGTACGGAGATGCTGCCTTGAGACAGCTGAGGTCACCGCGGCGTGCACAGGCCCCGAACGCTC
AGGAGTGTGGTTGTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .13 RPM
SRP007412_cerebellum 17 .39 RPM
SRP007412_heart 6 .41 RPM
SRP007412_kidney 9 .28 RPM
SRP007412_liver 11 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013866 ortholog_one2one 5 retrogenes
retro_chof_1017, retro_chof_1761, retro_chof_2377, retro_chof_64, retro_chof_703,
Echinops telfairi ENSETEG00000018042 ortholog_one2one 3 retrogenes
retro_etel_1163, retro_etel_122, retro_etel_681,
Macaca mulatta ENSMMUG00000017720 ortholog_one2one 1 retrogene
retro_mmul_2336,
Nomascus leucogenys ENSNLEG00000014339 ortholog_one2one 1 retrogene
retro_nleu_2062,
Pongo abelii ENSPPYG00000006573 other_paralog 1 retrogene
retro_pabe_618,
Pongo abelii ENSPPYG00000018056 other_paralog 1 retrogene
retro_pabe_3574,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3321 86.21 51.83
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Download FASTA sequences of all ENSPPYG00000000128 retrocopies