Parental gene:

AIDA, ENSPPYG00000000196

Aliases:None
Description:Axin interactor, dorsalization-associated protein [Source:UniProtKB/Swiss-Prot;Acc:Q5RAV3]
Organism:Orangutan (Pongo abelii)
Coordinates:1:26897125..26951219(+)


>ENSPPYG00000000196
ATGTCGGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAGGAGGCCCAAGCTCAACACAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACCATAGGCAAAATTGCAACATGCTTGGAATTGCGAAGTGCAGCTTTACAGTCCACA
CAGTCTCAAGAAGAATTTAAACTGGAGGACCTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACATATAATAAAGA
ATTCCCATTTGATGTTCAGCCTGTCCCATTAAGAAGAATTTTGGCACCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAAGAAGGTGGTGCTGGAGCAGGGTCTCCTGATTCTTTTCCTGCTAGAGTTCCCGGTACTTTATTACCAAGGTTG
CCATCGGAACCAGGAATGACATTACTCACTATCAGAATTGAGAAAATTGGTTTGAAAGATGCTGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGACTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAACATGTTGAAAAATTAACCAAAGGTGCAGCTATCTTC
TTTGAATTCAAACACTACAAGCCTAAAAAAAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCAACTGACTTTAAAAGAAAGAAATTGCAATTATTGACCAAGAAAC
CACTTTATCTTCATCTACATCAAACTTTGCACAAGGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .68 RPM
SRP007412_cerebellum 9 .36 RPM
SRP007412_heart 7 .22 RPM
SRP007412_kidney 7 .13 RPM
SRP007412_liver 4 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007593 ortholog_one2one 2 retrogenes
retro_btau_1163, retro_btau_573,
Choloepus hoffmanni ENSCHOG00000010095 ortholog_one2one 2 retrogenes
retro_chof_1919, retro_chof_97,
Dasypus novemcinctus ENSDNOG00000008380 ortholog_one2one 5 retrogenes
retro_dnov_1765, retro_dnov_1909, retro_dnov_1961, retro_dnov_2172, retro_dnov_2280,
Homo sapiens ENSG00000186063 ortholog_one2one 4 retrogenes
retro_hsap_1901, retro_hsap_2076, retro_hsap_2998, retro_hsap_410,
Gorilla gorilla ENSGGOG00000015289 ortholog_one2one 3 retrogenes
retro_ggor_1394, retro_ggor_1627, retro_ggor_2077,
Macaca mulatta ENSMMUG00000015025 ortholog_one2one 1 retrogene
retro_mmul_1918,
Monodelphis domestica ENSMODG00000004774 ortholog_one2one 3 retrogenes
retro_mdom_1417, retro_mdom_1418, retro_mdom_1448,
Nomascus leucogenys ENSNLEG00000013583 ortholog_one2one 1 retrogene
retro_nleu_748,
Oryctolagus cuniculus ENSOCUG00000017030 ortholog_one2many 1 retrogene
retro_ocun_688,
Pan troglodytes ENSPTRG00000002010 ortholog_one2one 3 retrogenes
retro_ptro_1254, retro_ptro_1528, retro_ptro_2027,
Tarsius syrichta ENSTSYG00000005745 ortholog_one2one 3 retrogenes
retro_tsyr_101, retro_tsyr_1795, retro_tsyr_514,
Tursiops truncatus ENSTTRG00000016594 ortholog_one2one 1 retrogene
retro_ttru_1084,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2015 95.10 100.00
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2. retro_pabe_2485 94.24 62.09
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Download FASTA sequences of all ENSPPYG00000000196 retrocopies