Parental gene: | AIDA, ENSPPYG00000000196 |
| Aliases: | None |
| Description: | Axin interactor, dorsalization-associated protein [Source:UniProtKB/Swiss-Prot;Acc:Q5RAV3] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:26897125..26951219(+) |
>ENSPPYG00000000196
ATGTCGGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAGGAGGCCCAAGCTCAACACAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACCATAGGCAAAATTGCAACATGCTTGGAATTGCGAAGTGCAGCTTTACAGTCCACA
CAGTCTCAAGAAGAATTTAAACTGGAGGACCTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACATATAATAAAGA
ATTCCCATTTGATGTTCAGCCTGTCCCATTAAGAAGAATTTTGGCACCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAAGAAGGTGGTGCTGGAGCAGGGTCTCCTGATTCTTTTCCTGCTAGAGTTCCCGGTACTTTATTACCAAGGTTG
CCATCGGAACCAGGAATGACATTACTCACTATCAGAATTGAGAAAATTGGTTTGAAAGATGCTGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGACTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAACATGTTGAAAAATTAACCAAAGGTGCAGCTATCTTC
TTTGAATTCAAACACTACAAGCCTAAAAAAAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCAACTGACTTTAAAAGAAAGAAATTGCAATTATTGACCAAGAAAC
CACTTTATCTTCATCTACATCAAACTTTGCACAAGGAATGA
ATGTCGGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAGGAGGCCCAAGCTCAACACAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACCATAGGCAAAATTGCAACATGCTTGGAATTGCGAAGTGCAGCTTTACAGTCCACA
CAGTCTCAAGAAGAATTTAAACTGGAGGACCTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACATATAATAAAGA
ATTCCCATTTGATGTTCAGCCTGTCCCATTAAGAAGAATTTTGGCACCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAAGAAGGTGGTGCTGGAGCAGGGTCTCCTGATTCTTTTCCTGCTAGAGTTCCCGGTACTTTATTACCAAGGTTG
CCATCGGAACCAGGAATGACATTACTCACTATCAGAATTGAGAAAATTGGTTTGAAAGATGCTGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGACTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAACATGTTGAAAAATTAACCAAAGGTGCAGCTATCTTC
TTTGAATTCAAACACTACAAGCCTAAAAAAAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCAACTGACTTTAAAAGAAAGAAATTGCAATTATTGACCAAGAAAC
CACTTTATCTTCATCTACATCAAACTTTGCACAAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .68 RPM |
| SRP007412_cerebellum | 9 .36 RPM |
| SRP007412_heart | 7 .22 RPM |
| SRP007412_kidney | 7 .13 RPM |
| SRP007412_liver | 4 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007593 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000010095 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008380 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000186063 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015289 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015025 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004774 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013583 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017030 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002010 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005745 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016594 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2015 | 95.10 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2485 | 94.24 | 62.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000000196 retrocopies