Parental gene:

AIDA, ENSPTRG00000002010

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:201934781..201979986(-)


>ENSPTRG00000002010
ATGTCGGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGGAGAGGCGCCGACTTCGACTCTTGGGGCCA
GCTGGTGGAGGCGATAGACGAGTATCAGATATTAGCAAGACATCTACAAAAGGAGGCCCAAGCTCAACACAATAATTCTG
AATTCACAGAAGAACAAAAGAAAACCATAGGCAAAATTGCAACATGCTTGGAATTGCGAAGTGCAGCTTTACAGTCCACA
CAGTCTCAAGAAGAATTTAAACTGGAGGACCTGAAGAAGCTAGAACCAATCCTAAAGAATATTCTTACATATAATAAAGA
ATTCCCATTTGATGTTCAGCCTGTCCCATTAAGAAGAATTTTGGCACCTGGTGAAGAAGAGAATTTGGAATTTGAAGAAG
ATGAAGAAGAGGGTGGTGCTGGAGCAGGGTCTCCTGATTCTTTTCCTGCTAGAGTTCCCGGTACTTTATTACCAAGGTTG
CCATCGGAACCAGGAATGACATTACTCACTATCAGAATTGAGAAAATTGGTTTGAAAGATGCTGGGCAGTGCATCGATCC
CTATATTACAGTTAGTGTAAAGGATCTGAATGGCATAGACTTAACTCCTGTGCAAGATACTCCTGTGGCTTCAAGAAAAG
AAGATACATATGTTCATTTTAATGTGGACATTGAGCTCCAGAAGCATGTTGAAAAATTAACTAAAGGTGCAGCTATCTTC
TTTGAATTCAAGCACTACAAGCCTAAAAAAAGGTTTACCAGCACCAAGTGTTTTGCTTTCATGGAGATGGATGAAATTAA
ACCTGGGCCAATTGTAATAGAACTATACAAGAAACCCACTGACTTTAAAAGAAAGAAATTGCAATTATTGACCAAGAAAC
CACTTTATCTTCATCTACATCAAACTTTGCACAAGGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .89 RPM
SRP007412_cerebellum 38 .47 RPM
SRP007412_heart 51 .79 RPM
SRP007412_kidney 42 .60 RPM
SRP007412_liver 40 .56 RPM
SRP007412_testis 131 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007593 ortholog_one2one 2 retrogenes
retro_btau_1163, retro_btau_573,
Choloepus hoffmanni ENSCHOG00000010095 ortholog_one2one 2 retrogenes
retro_chof_1919, retro_chof_97,
Dasypus novemcinctus ENSDNOG00000008380 ortholog_one2one 5 retrogenes
retro_dnov_1765, retro_dnov_1909, retro_dnov_1961, retro_dnov_2172, retro_dnov_2280,
Homo sapiens ENSG00000186063 ortholog_one2one 4 retrogenes
retro_hsap_1901, retro_hsap_2076, retro_hsap_2998, retro_hsap_410,
Gorilla gorilla ENSGGOG00000015289 ortholog_one2one 3 retrogenes
retro_ggor_1394, retro_ggor_1627, retro_ggor_2077,
Macaca mulatta ENSMMUG00000015025 ortholog_one2one 1 retrogene
retro_mmul_1918,
Monodelphis domestica ENSMODG00000004774 ortholog_one2one 3 retrogenes
retro_mdom_1417, retro_mdom_1418, retro_mdom_1448,
Nomascus leucogenys ENSNLEG00000013583 ortholog_one2one 1 retrogene
retro_nleu_748,
Oryctolagus cuniculus ENSOCUG00000017030 ortholog_one2many 1 retrogene
retro_ocun_688,
Pongo abelii ENSPPYG00000000196 ortholog_one2one 2 retrogenes
retro_pabe_2015, retro_pabe_2485,
Tarsius syrichta ENSTSYG00000005745 ortholog_one2one 3 retrogenes
retro_tsyr_101, retro_tsyr_1795, retro_tsyr_514,
Tursiops truncatus ENSTTRG00000016594 ortholog_one2one 1 retrogene
retro_ttru_1084,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1254 74.84 50.33
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2. retro_ptro_1528 94.46 100.00
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3. retro_ptro_2027 92.51 100.00
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Download FASTA sequences of all ENSPTRG00000002010 retrocopies