Parental gene: | PIP5K1A, ENSPPYG00000000872 |
| Aliases: | None |
| Description: | phosphatidylinositol-4-phosphate 5-kinase, type I, alpha [Source:HGNC Symbol;Acc:8994] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:100348977..100400738(-) |
>ENSPPYG00000000872
ATGGCGTCGGCCTCCTCCGGGCCATCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCTGTCCCTTCCTGTACCTCGTC
CTCAGCATCTGGAATCAAGAGACCCATGGCATCTGAGGTGCCTTATGCCTCTGGCATGCCCATCAAGAAAATAGGCCATA
GAAGTGTTGATTCCTCAGGAGAGACAACATATAAAAAGACAACCTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGCATT
ACCCACACTGTGGGGAGCCTGAGTACCAAACCAGAGCGTGATGTCCTCATGCAAGATTTCTACGTGGTAGAGAGTATCTT
CTTTCCCAGTGAAGGGAGCAACCTGACCCCTGCTCATCACTACAATGACTTTCGTTTCAAGACCTATGCACCTGTTGCCT
TCCGCTACTTCCGGGAGCTATTTGGTATCCGGCCCGATGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTC
TGTAGCTCTGGGGCTAGTGGTTCCCTGTTCTATGTGTCCAGCGACGATGAGTTCATTATTAAGACAGTCCAACATAAAGA
GGCGGAATTTCTGCAGAAGCTGCTTCCAGGATACTACATGAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAATTCT
ATGGACTGTACTGTGTGCAGGCAGGTGGCAAGAACATTCGGATTGTGGTGATGAACAATCTTTTACCAAGATCGGTAAAA
ATGCATATCAAATATGACCTCAAAGGCTCAACCTACAAACGGCGGGCTTCCCAGAAAGAGCGAGAGAAGCCTCTTCCCAC
ATTTAAAGACCTAGACTTCTTACAAGACATCCCTGATGGTCTTTTTTTGGATGCTGACATGTACAATGCTCTCTGTAAGA
CCCTGCAGCGTGACTGTTTGGTGTTGCAGAGCTTCAAGATAATGGATTATAGCCTCTTGATGTCAATCCATAATATAGAT
CATGCACAACGAGAGCCCTTAAGCAGCGAAACACAATACTCAGTTGATACTCGAAGACCGGCCCCCCAAAAGGCTCTGTA
TTCCACAGCCATGGAATCCATCCAGGGAGAGGCTCGACGGGGTGGTACCATGGAGACCGATGACCATATGGGTGGCATCC
CTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTTTATATTGGCATCATTGACATTCTACAGTCTTACAGGTTTGTTAAG
AAGTTGGAGCACTCTTGGAAAGCCCTGGTACATGACGGAGACACTGTCTCAGTGCATCGCCCAGGCTTCTACGCTGAACG
GTTCCAGCGCTTCATGTGCAACACAGTATTTAAGAAGATTCCCTTGAAGCCTTCTCCTTCCAAAAAGTTTCGGTCTGGCT
CATCTTTCTCTCGGCGAGCAGGCTCCAGTGGCAACTCCTGCATTACTTACCAGCCATCGGTCTCTGGGGAACACAAGGCA
CAAGTGACAACAAAGGCGGAAGTGGAGCCAGGCGTTCACCTTGGTCGTCCTGATGTTTTACCTCAGACTCCACCTTTGGA
GGAAATCAGTGAGGGCTCGCCTATTCCTGACCCCAGTTTCTCACCTCTAGTTGGAGAGACTTTGCAAATGCTAACTACAA
GTACAACCTTGGAAAAGCTTGAAGTTGCAGAGTCAGAGTTCACCCATTAA
ATGGCGTCGGCCTCCTCCGGGCCATCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCTGTCCCTTCCTGTACCTCGTC
CTCAGCATCTGGAATCAAGAGACCCATGGCATCTGAGGTGCCTTATGCCTCTGGCATGCCCATCAAGAAAATAGGCCATA
GAAGTGTTGATTCCTCAGGAGAGACAACATATAAAAAGACAACCTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGCATT
ACCCACACTGTGGGGAGCCTGAGTACCAAACCAGAGCGTGATGTCCTCATGCAAGATTTCTACGTGGTAGAGAGTATCTT
CTTTCCCAGTGAAGGGAGCAACCTGACCCCTGCTCATCACTACAATGACTTTCGTTTCAAGACCTATGCACCTGTTGCCT
TCCGCTACTTCCGGGAGCTATTTGGTATCCGGCCCGATGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTC
TGTAGCTCTGGGGCTAGTGGTTCCCTGTTCTATGTGTCCAGCGACGATGAGTTCATTATTAAGACAGTCCAACATAAAGA
GGCGGAATTTCTGCAGAAGCTGCTTCCAGGATACTACATGAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAATTCT
ATGGACTGTACTGTGTGCAGGCAGGTGGCAAGAACATTCGGATTGTGGTGATGAACAATCTTTTACCAAGATCGGTAAAA
ATGCATATCAAATATGACCTCAAAGGCTCAACCTACAAACGGCGGGCTTCCCAGAAAGAGCGAGAGAAGCCTCTTCCCAC
ATTTAAAGACCTAGACTTCTTACAAGACATCCCTGATGGTCTTTTTTTGGATGCTGACATGTACAATGCTCTCTGTAAGA
CCCTGCAGCGTGACTGTTTGGTGTTGCAGAGCTTCAAGATAATGGATTATAGCCTCTTGATGTCAATCCATAATATAGAT
CATGCACAACGAGAGCCCTTAAGCAGCGAAACACAATACTCAGTTGATACTCGAAGACCGGCCCCCCAAAAGGCTCTGTA
TTCCACAGCCATGGAATCCATCCAGGGAGAGGCTCGACGGGGTGGTACCATGGAGACCGATGACCATATGGGTGGCATCC
CTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTTTATATTGGCATCATTGACATTCTACAGTCTTACAGGTTTGTTAAG
AAGTTGGAGCACTCTTGGAAAGCCCTGGTACATGACGGAGACACTGTCTCAGTGCATCGCCCAGGCTTCTACGCTGAACG
GTTCCAGCGCTTCATGTGCAACACAGTATTTAAGAAGATTCCCTTGAAGCCTTCTCCTTCCAAAAAGTTTCGGTCTGGCT
CATCTTTCTCTCGGCGAGCAGGCTCCAGTGGCAACTCCTGCATTACTTACCAGCCATCGGTCTCTGGGGAACACAAGGCA
CAAGTGACAACAAAGGCGGAAGTGGAGCCAGGCGTTCACCTTGGTCGTCCTGATGTTTTACCTCAGACTCCACCTTTGGA
GGAAATCAGTGAGGGCTCGCCTATTCCTGACCCCAGTTTCTCACCTCTAGTTGGAGAGACTTTGCAAATGCTAACTACAA
GTACAACCTTGGAAAAGCTTGAAGTTGCAGAGTCAGAGTTCACCCATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 29 .97 RPM |
| SRP007412_cerebellum | 28 .33 RPM |
| SRP007412_heart | 17 .16 RPM |
| SRP007412_kidney | 21 .91 RPM |
| SRP007412_liver | 17 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000143398 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000005228 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010130 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002846 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001282 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_59 | 90.85 | 91.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_619 | 95.96 | 85.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3037 | 89.09 | 59.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_3112 | 81.11 | 74.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000000872 retrocopies