Parental gene: | SSX2IP, ENSPPYG00000001201 |
| Aliases: | None |
| Description: | synovial sarcoma, X breakpoint 2 interacting protein [Source:HGNC Symbol;Acc:16509] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:144337578..144365590(+) |
>ENSPPYG00000001201
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCTCAATATACCTCAGAAACAAA
GATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCA
GTGCCTTCTGCACAGAAGATAATATTGAACAGAGTATTTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTTTTAAATTGTATGAATGAGCTGCT
TGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATC
TACAGAGCTGCTACTCAAAACTTAAGGAACAATTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTACAAAAATTGCAAAATATCAT
TGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGAAAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATC
AACTTGTTATGAACAAGAAAGATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTGAATGATTATGAATATCGTCA
GAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTTCTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTC
CCCAAAAGAAGAAACCTAGAGAAAGAGTAGATGATAGTACAGGAACTGTTATTTCTGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAACAGCATCAGAAAACAGTGGAG
AATTTTGAAAAGTCATGTAGAAAAACTTGATAACCAAGTTTCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAA
TCTCACGACAAGACCATGAACAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAGCTTTTACAGCAGCAGCTCGCTACTGCATGTGATGATGATACCACTTCACTGTTACGAGACTGTTATTTGTTGGA
AGAAAAGGAACGCCTCAAAGAAGAATGGTCTCTTTTTAAAGAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTA
CAGAAGCCGCTATTCGCCTGGGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTTTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCAGGAAGTTCTGATCGGGACAA
TCTTATAGTGCACTCGAGGCAACCACAAAAGAAGCCTTACAGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTA
CTAAATCTCTTCCTGCTTCACCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATATCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAGTCAAAAATGGAGTGTGGCGTC
AAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCCTTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTAC
CTTAG
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCTCAATATACCTCAGAAACAAA
GATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCA
GTGCCTTCTGCACAGAAGATAATATTGAACAGAGTATTTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTTTTAAATTGTATGAATGAGCTGCT
TGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATC
TACAGAGCTGCTACTCAAAACTTAAGGAACAATTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTACAAAAATTGCAAAATATCAT
TGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGAAAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATC
AACTTGTTATGAACAAGAAAGATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTGAATGATTATGAATATCGTCA
GAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTTCTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTC
CCCAAAAGAAGAAACCTAGAGAAAGAGTAGATGATAGTACAGGAACTGTTATTTCTGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAACAGCATCAGAAAACAGTGGAG
AATTTTGAAAAGTCATGTAGAAAAACTTGATAACCAAGTTTCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAA
TCTCACGACAAGACCATGAACAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAGCTTTTACAGCAGCAGCTCGCTACTGCATGTGATGATGATACCACTTCACTGTTACGAGACTGTTATTTGTTGGA
AGAAAAGGAACGCCTCAAAGAAGAATGGTCTCTTTTTAAAGAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTA
CAGAAGCCGCTATTCGCCTGGGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTTTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCAGGAAGTTCTGATCGGGACAA
TCTTATAGTGCACTCGAGGCAACCACAAAAGAAGCCTTACAGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTA
CTAAATCTCTTCCTGCTTCACCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATATCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAGTCAAAAATGGAGTGTGGCGTC
AAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCCTTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTAC
CTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 46 .94 RPM |
| SRP007412_cerebellum | 63 .84 RPM |
| SRP007412_heart | 4 .67 RPM |
| SRP007412_kidney | 11 .97 RPM |
| SRP007412_liver | 6 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000117155 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000906 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004276 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008402 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2206 | 74.04 | 50.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001201 retrocopies