Parental gene: | SSX2IP, ENSPTRG00000000906 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:85372996..85400687(-) |
>ENSPTRG00000000906
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCTCAATATACCTCAGAAACAAA
GATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCA
GTGCCTTCTGCACAGAAGATAATATTGAACAGAGTATCTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTACTAAATTGTATGAATGAGCTGCT
TGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATC
TACAGAGCTGCTACTCAAAACTTAAGGAACAACTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTGCAAAAATTACAAAATATCAT
TGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGAAAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATC
AACTTGTTATGAACAAGAAAGATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTGAATGATTATGAATATCGTCA
GAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTTCTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTC
CCCAAAAGAAGAAACCTAGAGAAAGAGTAGATGATAGTACAGGAACTGTTATTTCTGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAACAGCATCAGAAAACAGTGGAG
AATTTTGAAAAGTCATGTAGAAAAACTTGATAACCAAGTTTCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAA
TCTCACGACAAGACCATGAACAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAACTTTTACAGCAGCAGCTCGCTACTGCATGTGATGATGATACCACTTCACTATTACGAGACTGTTATTTGTTGGA
AGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTTTTTAAAGAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTA
CAGAAGCCGCTATTCGCCTGGGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTTTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCAGGAAGTTCTGATTGGGACAA
TCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAGCCTCACAGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTA
CTAAATCTCTTCCTGCTTCACCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATGTCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAATCAAAAATGGAGTGTGGCGTC
AAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCCTTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTAC
CTTAG
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCTCAATATACCTCAGAAACAAA
GATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCA
GTGCCTTCTGCACAGAAGATAATATTGAACAGAGTATCTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTACTAAATTGTATGAATGAGCTGCT
TGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATC
TACAGAGCTGCTACTCAAAACTTAAGGAACAACTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTGCAAAAATTACAAAATATCAT
TGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGAAAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATC
AACTTGTTATGAACAAGAAAGATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTGAATGATTATGAATATCGTCA
GAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTTCTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTC
CCCAAAAGAAGAAACCTAGAGAAAGAGTAGATGATAGTACAGGAACTGTTATTTCTGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAACAGCATCAGAAAACAGTGGAG
AATTTTGAAAAGTCATGTAGAAAAACTTGATAACCAAGTTTCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAA
TCTCACGACAAGACCATGAACAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAACTTTTACAGCAGCAGCTCGCTACTGCATGTGATGATGATACCACTTCACTATTACGAGACTGTTATTTGTTGGA
AGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTTTTTAAAGAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTA
CAGAAGCCGCTATTCGCCTGGGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTTTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCAGGAAGTTCTGATTGGGACAA
TCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAGCCTCACAGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTA
CTAAATCTCTTCCTGCTTCACCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATGTCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAATCAAAAATGGAGTGTGGCGTC
AAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCCTTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTAC
CTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 62 .86 RPM |
| SRP007412_cerebellum | 49 .90 RPM |
| SRP007412_heart | 5 .65 RPM |
| SRP007412_kidney | 35 .57 RPM |
| SRP007412_liver | 9 .46 RPM |
| SRP007412_testis | 427 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000117155 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001201 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004276 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008402 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1913 | 73.87 | 50.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000906 retrocopies