Parental gene:

CCDC86, ENSPPYG00000003205

Aliases:None
Description:coiled-coil domain-containing protein 86 [Source:RefSeq peptide;Acc:NP_001127360]
Organism:Orangutan (Pongo abelii)
Coordinates:11:15582438..15591780(-)


>ENSPPYG00000003205
ATGGATACACCGTTAAGGCGCAGCCGACGGCTGGGAGGCCTAAGGCCCGAATGCCCCGAGAGCCTCACCTCAGTTTCGCG
GACGAGACGGGCCCTTGTGGAGCTCGAGTCGAACCCAGAAGAAACGAGGGAGCCCGGGTCTCCTCCGAGTGTGCAGCGGG
CTGGCCTGGGGTCCCCCGAAAGGCCGCCGAAGACAAGTCCAGGATCACCCCGTCTGCAGCAGGGTTCAGGCTTGGAGTCC
CCCCAAGGGCAGCCAGAGCCAGGCGCAGGGTCCCCCCAGCGTCAGCAAGACCTGCACCTGGAGTCGCCTCAAAGACAGCC
GGAGTACAGTCCTGAATCCCCACGATGTCAGCCGAAGCCAAGTGAGGAGGTACCAAAGTGTTCTCAGGACCAGGGAGTAC
TGGCCTCGGAGTTGGCCCAGAGTAAGGAGGAGCTGACCCCGGGGGCCCCCCAGCATCAGCTACCGCCGGTCCCAGGATCA
CCAGAGCCTTACCCCGGTCAGCAAGCTCCCGGTCCGGAGCCCTCTCAGCCACTACTGGAGCTGACACCCAGGGCACCTGG
CTCCCCCCGGGGTCAGCATGAGCCGAGCAAGCCACCTCCAGCTGGGGAGACGGTGACAGGCGGCTTCGGGGCAAAGAAGC
GAAAAGGTTCTTCATCCCAGGCCCCAGCGTCCAAGAAGTTGAACAAAGAGGAGCTTCCTGTAATCCCGAAGGGGAAGCCC
AAATCGGGGCGAGTGTGGAAGGACCGCTCCAAGAAAAGATTCTCCCAGATGCTTCAGGACAAGCCCCTGCGCACATCGTG
GCAGCGGAAGATGAAGGAACGGCAGGAGAGGAAGCTGGCCAAGGACTTTGCCCGTCACCTGGAGGAGGAGAAGGAGAGGC
GCCGCCAGGAGAAGAAACAGCGCCGGGCCGAGAACCTGAAACGCCGCCTGGAGAATGAGCGGAAGGCAGAGGTCGTCCAA
GTGATCCGAAACCCCGCCAAGCTCAAGCGGGCAAAGAAGAAGCAGCTGCGCTCCATTGAAAAGCGGGACACCCTGGCCCT
GCTGCAGAAGCAGCCGCCCCAGCGGCCGGCAGCCAAGATCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .13 RPM
SRP007412_cerebellum 5 .35 RPM
SRP007412_heart 3 .61 RPM
SRP007412_kidney 16 .67 RPM
SRP007412_liver 7 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000110104 ortholog_one2one 2 retrogenes
retro_hsap_3276, retro_hsap_3834,
Gorilla gorilla ENSGGOG00000013670 ortholog_one2one 1 retrogene
retro_ggor_2582,
Macaca mulatta ENSMMUG00000000019 ortholog_one2one 1 retrogene
retro_mmul_1622,
Nomascus leucogenys ENSNLEG00000013582 ortholog_one2one 1 retrogene
retro_nleu_2131,
Pan troglodytes ENSPTRG00000003721 ortholog_one2one 2 retrogenes
retro_ptro_2216, retro_ptro_2610,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2818 66.67 93.89
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Download FASTA sequences of all ENSPPYG00000003205 retrocopies