Parental gene: | CCDC86, ENSPTRG00000003721 |
| Aliases: | None |
| Description: | Pan troglodytes coiled-coil domain containing 86 (CCDC86), mRNA. [Source:RefSeq mRNA;Acc:NM_001246553] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:58670405..58679534(+) |
>ENSPTRG00000003721
ATGGATACACCGTTAAGGCGCAGCCGACGGCTGGGAGGCCTAAGGCCCGAATCCCCCGAGAGCCTCACCTCAGTTTCGCG
GACGAGACGGGCCCTTGTGGAGTTCGAGTCGAACCCAGAAGAAACGAGGGAGCCCGGGTCTCCTCCGAGTGTGCAGCGGG
CTGGCCTGGGGTCCCCCGAAAGGCCGCCGAAGACAAGCCCAGGATCACCCCGTCTGCAGCAGGATGCAGGCTTGGAGTCC
CCCCAAGGGCAGCCAGAGCCAGGCGCAGCGTCCCCCCAGCGTCAGCAAGACCTACACCTGGAGTCGCCTCAAAGACAGCC
GGAGTACAGTCCTGAATCCCCACGATGTCAGCCGAAGCCAAGTGAGGAGGCACCAAAGTGTTCTCAGGACCAGGGAGTAC
TGGCCTCGGAGTTGGCCCAGAGTAAGGAGGAGCTGACCCCGGGGGCCCCCCAGCATCAGCTACCGCCGGTCCCGGGATCA
CCAGAGCCTTACCCCGGTCAGCAAGCTCCCGGTCCGGAGCCCTCTCAGCCACTACTGGAGCTGACACCCAGGGCACCTGG
CTCCCCCCGGGGTCAGCATGAGCCGAGCAAACCACCTCCAGCTGGGGAGACGGTGACAGGCGGCTTCGGGGCAAAGAAGC
GAAAAGGTTCTTCATCCCAGGCCCTAGCGTCCAAGACGTTGAATAAAGAGGAGCTTCCTGTAATCCCAAAGGGGAAGCCC
AAATCGGGACGAGTGTGGAAGGACCGCTCCAAGAAAAGATTCTCCCAGATGCTTCAGGACAAGCCCCTGCGCACATCGTG
GCAGCGGAAGATGAAGGAACGGCAGGAGAGGAAGCTGGCCAAGGACTTTGCCCGTCACCTGGAGGAGGAGAAGGAGAGGC
GCCGCCAGGAGAAGAAACAGCGCCGGGCTGAGAACCTGAAACGCCGCCTGGAGAATGAGCGGAAGGCAGAGGTCGTCCAA
GTGATCCGAAACCCCGCCAAGCTCAAGCGGGCAAAGAAGAAGCAGCTGCGCTCCATTGAGAAGCGGGACACCCTGGCCCT
GCTGCAGAAGCAGCCGCCCCAGCAGCCGGCAGCCAAGATCTGA
ATGGATACACCGTTAAGGCGCAGCCGACGGCTGGGAGGCCTAAGGCCCGAATCCCCCGAGAGCCTCACCTCAGTTTCGCG
GACGAGACGGGCCCTTGTGGAGTTCGAGTCGAACCCAGAAGAAACGAGGGAGCCCGGGTCTCCTCCGAGTGTGCAGCGGG
CTGGCCTGGGGTCCCCCGAAAGGCCGCCGAAGACAAGCCCAGGATCACCCCGTCTGCAGCAGGATGCAGGCTTGGAGTCC
CCCCAAGGGCAGCCAGAGCCAGGCGCAGCGTCCCCCCAGCGTCAGCAAGACCTACACCTGGAGTCGCCTCAAAGACAGCC
GGAGTACAGTCCTGAATCCCCACGATGTCAGCCGAAGCCAAGTGAGGAGGCACCAAAGTGTTCTCAGGACCAGGGAGTAC
TGGCCTCGGAGTTGGCCCAGAGTAAGGAGGAGCTGACCCCGGGGGCCCCCCAGCATCAGCTACCGCCGGTCCCGGGATCA
CCAGAGCCTTACCCCGGTCAGCAAGCTCCCGGTCCGGAGCCCTCTCAGCCACTACTGGAGCTGACACCCAGGGCACCTGG
CTCCCCCCGGGGTCAGCATGAGCCGAGCAAACCACCTCCAGCTGGGGAGACGGTGACAGGCGGCTTCGGGGCAAAGAAGC
GAAAAGGTTCTTCATCCCAGGCCCTAGCGTCCAAGACGTTGAATAAAGAGGAGCTTCCTGTAATCCCAAAGGGGAAGCCC
AAATCGGGACGAGTGTGGAAGGACCGCTCCAAGAAAAGATTCTCCCAGATGCTTCAGGACAAGCCCCTGCGCACATCGTG
GCAGCGGAAGATGAAGGAACGGCAGGAGAGGAAGCTGGCCAAGGACTTTGCCCGTCACCTGGAGGAGGAGAAGGAGAGGC
GCCGCCAGGAGAAGAAACAGCGCCGGGCTGAGAACCTGAAACGCCGCCTGGAGAATGAGCGGAAGGCAGAGGTCGTCCAA
GTGATCCGAAACCCCGCCAAGCTCAAGCGGGCAAAGAAGAAGCAGCTGCGCTCCATTGAGAAGCGGGACACCCTGGCCCT
GCTGCAGAAGCAGCCGCCCCAGCAGCCGGCAGCCAAGATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .03 RPM |
| SRP007412_cerebellum | 11 .69 RPM |
| SRP007412_heart | 5 .48 RPM |
| SRP007412_kidney | 9 .07 RPM |
| SRP007412_liver | 10 .05 RPM |
| SRP007412_testis | 57 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000110104 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013670 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000019 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013582 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003205 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2216 | 64.31 | 72.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2610 | 76.36 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000003721 retrocopies