Parental gene: | CCNB2, ENSPPYG00000006517 |
| Aliases: | None |
| Description: | cyclin B2 [Source:HGNC Symbol;Acc:1580] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 15:56017222..56037659(+) |
>ENSPPYG00000006517
ATGGCGCTGCTCCGACGCCCGACGGTGTCCAGTAATTTGGAGAATATTGACACAGGAGTTAATTCTAAAGTTAAGAGTCA
TGTGACTATTAGGCGAACTGTTTTAGAAGAAATTGGAAATAGAGTTACAACCAGAGCAGCACAAGTAGCTAAGAAAGCTC
AGAACACCAAAGTTCCAGTTCAACCCACCAAAACAACAAATGTCAACAAACAACTGAAACCTACTGCTTCTGTCAAACCA
GTACAGATGGAAATGTTGGCTCCAAAGGGTCCTTCTCCCACACCTGAGGATATCTCCATGAAGGAAGAGAATCTCTGCCA
AGCTTTTTCTGATGCCTTGCTCTGCAAAATCGAGGACATTGATAACGAAGATTGGGAGAACCCTCAGCTCTGCAGTGACT
ACGTTAAGGATATCTATCAGTATCTCAGGCAGCTGGAGGTTTTGCAGTCCATAAACCCACATTTCTTAGATGGAAGAGAT
ATAAATGGACGCATGCGTGCCATCCTAGTGGATTGGCTGGTGCAAGTCCACTCCAAGTTTAGGCTTCTGCAGGAGACTCT
GTACATGTGCATTGCCATTATGGATCGATTTTTACAGGTTCAGCCAGTTTCCCGGAAGAAGCTTCAATTAGTTGGGATTA
CTGCTCTGCTCTTGGCTTCCAAGTATGAGGAGATGTTTTCTCCAAATATTGAAGACTTTGTTTACATCACAGACAATGCT
TATACCAGTTCCCAAATCCGAGAAATGGAAACTCTAATTTTGAAAGAATTGAAATTTGAGTTGGGTCGACCCTTGCCACT
ACACTTCTTAAGGCGAGCATCAAAAGCCGGNNNNGTTGATGTTGAACAGCACACTTTAGCCAAATATTTGATGGAGCTGA
CTCTCATCGACTACGATATGGTGCATTATCATCCTTCTAAGGTAGCAGCAGCTGCTTCCTGCTTGTCTCAGAAGGTTCTA
GGACAAGGCAAATGGAACTTAAAGCAGCAGTATTACACGGGATACACAGAGAATGAAGTATTGGAAGTCATGCAACACAT
GGCCAAGAATGTGGTGAAAGTAAATGAAAACTTAACTAAATTCATCGCCATCAAGAATAAGTATGCAAGCAGCAAACTCC
TGAAGATCAGCATGATCCCTCAGCTGAACTCAAAAGCCGTCAAAGACCTTGCCTCCCCACTGATGGGAAGGTCC
ATGGCGCTGCTCCGACGCCCGACGGTGTCCAGTAATTTGGAGAATATTGACACAGGAGTTAATTCTAAAGTTAAGAGTCA
TGTGACTATTAGGCGAACTGTTTTAGAAGAAATTGGAAATAGAGTTACAACCAGAGCAGCACAAGTAGCTAAGAAAGCTC
AGAACACCAAAGTTCCAGTTCAACCCACCAAAACAACAAATGTCAACAAACAACTGAAACCTACTGCTTCTGTCAAACCA
GTACAGATGGAAATGTTGGCTCCAAAGGGTCCTTCTCCCACACCTGAGGATATCTCCATGAAGGAAGAGAATCTCTGCCA
AGCTTTTTCTGATGCCTTGCTCTGCAAAATCGAGGACATTGATAACGAAGATTGGGAGAACCCTCAGCTCTGCAGTGACT
ACGTTAAGGATATCTATCAGTATCTCAGGCAGCTGGAGGTTTTGCAGTCCATAAACCCACATTTCTTAGATGGAAGAGAT
ATAAATGGACGCATGCGTGCCATCCTAGTGGATTGGCTGGTGCAAGTCCACTCCAAGTTTAGGCTTCTGCAGGAGACTCT
GTACATGTGCATTGCCATTATGGATCGATTTTTACAGGTTCAGCCAGTTTCCCGGAAGAAGCTTCAATTAGTTGGGATTA
CTGCTCTGCTCTTGGCTTCCAAGTATGAGGAGATGTTTTCTCCAAATATTGAAGACTTTGTTTACATCACAGACAATGCT
TATACCAGTTCCCAAATCCGAGAAATGGAAACTCTAATTTTGAAAGAATTGAAATTTGAGTTGGGTCGACCCTTGCCACT
ACACTTCTTAAGGCGAGCATCAAAAGCCGGNNNNGTTGATGTTGAACAGCACACTTTAGCCAAATATTTGATGGAGCTGA
CTCTCATCGACTACGATATGGTGCATTATCATCCTTCTAAGGTAGCAGCAGCTGCTTCCTGCTTGTCTCAGAAGGTTCTA
GGACAAGGCAAATGGAACTTAAAGCAGCAGTATTACACGGGATACACAGAGAATGAAGTATTGGAAGTCATGCAACACAT
GGCCAAGAATGTGGTGAAAGTAAATGAAAACTTAACTAAATTCATCGCCATCAAGAATAAGTATGCAAGCAGCAAACTCC
TGAAGATCAGCATGATCCCTCAGCTGAACTCAAAAGCCGTCAAAGACCTTGCCTCCCCACTGATGGGAAGGTCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .44 RPM |
| SRP007412_cerebellum | 0 .12 RPM |
| SRP007412_heart | 0 .30 RPM |
| SRP007412_kidney | 0 .70 RPM |
| SRP007412_liver | 0 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005269 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000157456 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011543 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012885 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007123 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001275 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013818 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3073 | 72.41 | 50.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3074 | 84.55 | 58.29 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000006517 retrocopies