Parental gene:

IST1, ENSPPYG00000007522

Aliases:None
Description:IST1 homolog [Source:RefSeq peptide;Acc:NP_001126550]
Organism:Orangutan (Pongo abelii)
Coordinates:16:59889491..59922218(-)


>ENSPPYG00000007522
ATGCTGGGCTCTGGATTTAAAGCTGAGCGCTTAAGAGTGAATTTGAGATTAGTCATAAATCGCCTTAAACTATTGGAGAA
AAAGAAAACGGAACTGGCCCAGAAAGCAAGGAAGGAGATTGCTGACTATCTGGCTGCTGGGAAAGATGAACGAGCTCGGA
TCCGTGTGGAGCACATTATCCGGGAAGACTACCTTGTGGAGGCCATGGAGATCCTGGAGCTGTACTGTGACCTGCTGCTG
GCTCGGTTTGGCCTTATCCAGTCTATGAAGGAACTAGATTCTGGTCTGGCTGAATCTGTGTCTACATTGATCTGGGCTGC
TCCTCGACTCCAGTCAGAAGTGGCTGAGTTGAAAATAGTTGCTGATCAGCTGTGTGCCAAGTATAGCAAGGAATATGGCA
AGCTATGTAGGACCAACCAGATTGGAACTGTGAATGACAGGCTAATGCACAAGCTGAGTGTAGAAGCCCCACCCAAAATC
CTGGTGGAGAGATACCTGATTGAAATTGCGAAGAATTACAATGTACCCTATGAACCTGACTCTGTGGTCATGGCAGAAGC
TCCTCCTGGGGTAGAGACAGATCTTATTGATGTTGGATTCACAGATGATGTGAAGAAAGGAGGCCCTGGAAGAGGAGGGG
GTGGTGGCTTCACAGCACCAGTTGGTGGACCTGAGGGAACGGTGCCAATGCCCATGCCCATGCCTATGCCATCTGCAAAT
ACGCCTTTCTCATATCCACTGCCAAAGGGACCATCAGATTTCAATGGACTGCCAATGGGGACTTATCAGGCCTTTCCCAT
TATTCATCCACCTCAGATACCAGCAACTCCCCCATCGTATGAATCTGTAATTTTGATCAACTCCTACGAGACTCAGTCTC
AAAAAAAAAAAAAAGTTCGTCCTGGACCCAAGCCAGAAGCCTCTGCAAAGCTTCCTTCCAGACCTGCGGATAACTATGAC
AACTTTGTCCTACCAGAGTTGCCATCTGTGCCAGACACACTACCAACTGCATCTGCTGGTGCCAGCACCTCAGCATCTGA
AGACATTGACTTTGATGATCTTTCCCGGAGATTTGAAGAGCTGAAAAAGAAAACATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 35 .83 RPM
SRP007412_cerebellum 43 .78 RPM
SRP007412_heart 18 .60 RPM
SRP007412_kidney 39 .21 RPM
SRP007412_liver 24 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015051 ortholog_one2one 1 retrogene
retro_cjac_1906,
Dipodomys ordii ENSDORG00000002409 ortholog_one2one 1 retrogene
retro_dord_398,
Gorilla gorilla ENSGGOG00000001863 ortholog_one2one 1 retrogene
retro_ggor_1446,
Mustela putorius furo ENSMPUG00000007857 ortholog_one2one 1 retrogene
retro_mputfur_415,
Sus scrofa ENSSSCG00000002743 ortholog_one2many 1 retrogene
retro_sscr_349,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1695 94.12 55.62
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Download FASTA sequences of all ENSPPYG00000007522 retrocopies