Parental gene: | ENSSSCG00000002743 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:14464799..14477962(-) |
>ENSSSCG00000002743
CTGGTTTTCCAGCTTTCGGTGCATGAGGAACAGCACAGCATGTTGGGCTCTGGATTTAAAGCTGAGCGTTTACGAGTCAA
TTTGAGATTAGTCATAAACCGTCTTAAACTATTGGAGAAAAAAAAAACGGAACTAGCCCAGAAAGCAAGAAAAGAGATTG
CTGACTATCTGGCTGCTGGGAAAGATGAACGAGCTCGAATCCGAGTGGAGCACATTATTCGAGAAGACTACCTTGTGGAG
GCCATGGAGATCCTGGAGCTGTACTGTGACCTGCTGCTGGCTCGGTTTGGCCTCATCCAGTCTATGAAGGAGTTAGATTC
TGGTTTGGCTGAATCTGTGTCTACGCTGATTTGGGCTGCTCCTCGCCTCCAGTCAGAGGTGGCTGAGTTGAAAATAGTTG
CTGATCAACTCTGTGCTAAGTATAGCAAGGAGTATGGCAAGTTATGTAGGACCAACCAGATTGGAACTGTGAATGACAGG
CTAATGCACAAACTGAGTGTGGAAGCCCCACCCAAGATCCTGGTGGAGAGATACCTGATTGAAATTGCGAAGAACTACAA
CGTGCCCTATGAGCCTGACTCTGTGGTCATGGCAGAAGCTCCTCCTGGAGTAGAGACGGATCTTATTGATGTTGGATTCA
CAGATGATGTGAAGAAAGGGGGCTCTGGAAGAGGAGGCGGGGGTGGGTTCACAGCACCAGTTGGGGGACCTGATGGAACG
GTGCCAATGCCTATGCCCATGCCCATGCCATCTCCAAGTACTCCTTTCTCGTACCCGCTTCCAAAGGGACCATCGGATTT
CAATGGATTGCCAGTGGGAACTTATCAGGCCTTTCCCAATATTCATCCACCTCAGATTCCAGCAACTCCCCCATCGTATG
AATCTGTAAGTGCCTGA
CTGGTTTTCCAGCTTTCGGTGCATGAGGAACAGCACAGCATGTTGGGCTCTGGATTTAAAGCTGAGCGTTTACGAGTCAA
TTTGAGATTAGTCATAAACCGTCTTAAACTATTGGAGAAAAAAAAAACGGAACTAGCCCAGAAAGCAAGAAAAGAGATTG
CTGACTATCTGGCTGCTGGGAAAGATGAACGAGCTCGAATCCGAGTGGAGCACATTATTCGAGAAGACTACCTTGTGGAG
GCCATGGAGATCCTGGAGCTGTACTGTGACCTGCTGCTGGCTCGGTTTGGCCTCATCCAGTCTATGAAGGAGTTAGATTC
TGGTTTGGCTGAATCTGTGTCTACGCTGATTTGGGCTGCTCCTCGCCTCCAGTCAGAGGTGGCTGAGTTGAAAATAGTTG
CTGATCAACTCTGTGCTAAGTATAGCAAGGAGTATGGCAAGTTATGTAGGACCAACCAGATTGGAACTGTGAATGACAGG
CTAATGCACAAACTGAGTGTGGAAGCCCCACCCAAGATCCTGGTGGAGAGATACCTGATTGAAATTGCGAAGAACTACAA
CGTGCCCTATGAGCCTGACTCTGTGGTCATGGCAGAAGCTCCTCCTGGAGTAGAGACGGATCTTATTGATGTTGGATTCA
CAGATGATGTGAAGAAAGGGGGCTCTGGAAGAGGAGGCGGGGGTGGGTTCACAGCACCAGTTGGGGGACCTGATGGAACG
GTGCCAATGCCTATGCCCATGCCCATGCCATCTCCAAGTACTCCTTTCTCGTACCCGCTTCCAAAGGGACCATCGGATTT
CAATGGATTGCCAGTGGGAACTTATCAGGCCTTTCCCAATATTCATCCACCTCAGATTCCAGCAACTCCCCCATCGTATG
AATCTGTAAGTGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 30 .79 RPM |
| SRP014902_testis | 42 .29 RPM |
| SRP018856_adipose | 83 .76 RPM |
| SRP018288_kidney | 38 .42 RPM |
| SRP018288_lung | 41 .24 RPM |
| SRP018288_liver | 23 .03 RPM |
| SRP018288_heart | 28 .47 RPM |
| SRP035408_liver | 19 .08 RPM |
| SRP035408_brain | 22 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015051 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000002409 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001863 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007857 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007522 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_349 | 76.23 | 87.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000002743 retrocopies