Parental gene:

ATP5G1, ENSPPYG00000008909

Aliases:None
Description:ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841]
Organism:Orangutan (Pongo abelii)
Coordinates:17_random:12812375..12815737(+)


>ENSPPYG00000008909
ATGCAGACTGCCGGGGCATTATTCATTTCTCCAGCTCTGATCCGCTGTTGTACCAGGGGTCTAATCAGGCCTGTGTCTGC
CTCCTTCTTGAATAGCCCAGTGAATTCATCTAAACAGCCTTCCTACAGCAACTTCCCACTCCAGGTGGCCAGACGGGAGT
TCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCAGCCAAGTTTATTGGTGCTGGGGCAGCCACAGTTGGTGTGGCT
GGTTCAGGGGCTGGCATTGGAACCGTGTTTGGCAGCTTGATCATTGGCTATGCCAGGAACCCATCTCTCAAGCAGCAGCT
CTTCTCCTATGCCATTCTCGGCTTTGCCCTGTCTGAGGCCATGGGGCTCTTCTGTTTGATGGTTGCCTTCCTCATCCTCT
TCGCCATGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 42 .19 RPM
SRP007412_cerebellum 20 .31 RPM
SRP007412_heart 72 .13 RPM
SRP007412_kidney 62 .55 RPM
SRP007412_liver 32 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000006341 ortholog_one2many 1 retrogene
retro_acar_9,
Canis familiaris ENSCAFG00000016880 ortholog_one2one 5 retrogenes
retro_cfam_1583, retro_cfam_1621, retro_cfam_1882, retro_cfam_336, retro_cfam_647,
Callithrix jacchus ENSCJAG00000007352 ortholog_one2one 7 retrogenes
retro_cjac_1190, retro_cjac_1549, retro_cjac_161, retro_cjac_1878, retro_cjac_289, retro_cjac_4060, retro_cjac_679,
Cavia porcellus ENSCPOG00000009017 possible_ortholog 2 retrogenes
retro_cpor_43, retro_cpor_550,
Equus caballus ENSECAG00000019908 ortholog_one2one 1 retrogene
retro_ecab_463,
Felis catus ENSFCAG00000002344 ortholog_one2one 2 retrogenes
retro_fcat_1165, retro_fcat_1346,
Homo sapiens ENSG00000159199 ortholog_one2one 8 retrogenes
retro_hsap_1054, retro_hsap_1234, retro_hsap_1397, retro_hsap_1464, retro_hsap_2844, retro_hsap_2882, retro_hsap_597, retro_hsap_686,
Gorilla gorilla ENSGGOG00000001626 ortholog_one2one 8 retrogenes
retro_ggor_1083, retro_ggor_1125, retro_ggor_1388, retro_ggor_1998, retro_ggor_528, retro_ggor_589, retro_ggor_831, retro_ggor_967,
Loxodonta africana ENSLAFG00000004537 ortholog_one2one 2 retrogenes
retro_lafr_341, retro_lafr_522,
Macropus eugenii ENSMEUG00000005744 ortholog_one2one 2 retrogenes
retro_meug_1650, retro_meug_1973,
Myotis lucifugus ENSMLUG00000011738 ortholog_one2one 4 retrogenes
retro_mluc_1276, retro_mluc_1508, retro_mluc_1885, retro_mluc_2498,
Macaca mulatta ENSMMUG00000013395 ortholog_one2many 1 retrogene
retro_mmul_173,
Mustela putorius furo ENSMPUG00000015341 ortholog_one2one 3 retrogenes
retro_mputfur_1575, retro_mputfur_479, retro_mputfur_497,
Nomascus leucogenys ENSNLEG00000002718 ortholog_one2one 6 retrogenes
retro_nleu_1082, retro_nleu_1475, retro_nleu_2074, retro_nleu_2219, retro_nleu_623, retro_nleu_777,
Pongo abelii ENSPPYG00000004586 within_species_paralog 7 retrogenes
retro_pabe_1211, retro_pabe_1212, retro_pabe_2073, retro_pabe_2255, retro_pabe_236, retro_pabe_3088, retro_pabe_3741,
Pan troglodytes ENSPTRG00000009364 ortholog_one2one 8 retrogenes
retro_ptro_1273, retro_ptro_1926, retro_ptro_1950, retro_ptro_440, retro_ptro_491, retro_ptro_718, retro_ptro_847, retro_ptro_960,
Rattus norvegicus ENSRNOG00000007235 possible_ortholog 5 retrogenes
retro_rnor_1342, retro_rnor_2240, retro_rnor_529, retro_rnor_64, retro_rnor_880,
Ictidomys tridecemlineatus ENSSTOG00000013404 ortholog_one2one 2 retrogenes
retro_itri_1604, retro_itri_560,
Tupaia belangeri ENSTBEG00000003575 ortholog_one2one 5 retrogenes
retro_tbel_2765, retro_tbel_3270, retro_tbel_3540, retro_tbel_387, retro_tbel_4002,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_537 82.84 98.53
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2. retro_pabe_593 86.21 85.29
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3. retro_pabe_879 85.07 98.53
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4. retro_pabe_1027 83.21 100.00
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5. retro_pabe_1156 80.88 100.00
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6. retro_pabe_1576 85.40 100.00
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7. retro_pabe_1607 86.13 100.00
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8. retro_pabe_2353 71.79 57.35
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9. retro_pabe_2387 84.54 71.32
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Download FASTA sequences of all ENSPPYG00000008909 retrocopies