Parental gene:

MYL12B, ENSPPYG00000009032

Aliases:None
Description:myosin, light chain 12B, regulatory [Source:HGNC Symbol;Acc:29827]
Organism:Orangutan (Pongo abelii)
Coordinates:18:29266652..29283620(-)


>ENSPPYG00000009032
ATGTCAAGCAAAAAGGCAAAGACCAAGACCACCAAGAAGCGCCCTCAGCGTGCAACATCCAATGTGTTTGCCATGTTTGA
CCAGTCACAGATTCAGGAGTTCAAAGAGGCCTTCAACATGATTGATCAGAATAGAGATGGCTTCATCGACAAGGAAGATT
TGCATGATATGCTTGCTTCTCTAGGGAAGAATCCCACTGATGCATACCTTGATGCCATGATGAATGAGGCACCAGGGCCC
ATCAATTTCACCATGTTCCTGACCATGTTTGGTGAGAAGTTAAATGGCACAGATCCTGAAGATGTCATCAGAAACGCCTT
TGCTTGCTTTGATGAAGAAGCAACAGGTACCATTCAGGAAGATTACCTGAGAGAGCTGCTGACAACCATGGGGGATCGGT
TTACGGATGAGGAAGTGGATGAGCTGTACAGAGAAGCACCTATTGACAAAAAGGGGAATTTCAATTACATCGAGTTCACA
CGCATCCTGAAACATGGAGCCAAAGACAAAGATGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 67 .34 RPM
SRP007412_cerebellum 74 .06 RPM
SRP007412_heart 69 .60 RPM
SRP007412_kidney 139 .71 RPM
SRP007412_liver 92 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012665 ortholog_one2one 1 retrogene
retro_amel_1847,
Canis familiaris ENSCAFG00000032168 ortholog_one2one 1 retrogene
retro_cfam_1224,
Dasypus novemcinctus ENSDNOG00000007004 ortholog_one2one 2 retrogenes
retro_dnov_463, retro_dnov_953,
Dipodomys ordii ENSDORG00000007562 ortholog_one2one 1 retrogene
retro_dord_531,
Erinaceus europaeus ENSEEUG00000006985 ortholog_one2many 1 retrogene
retro_eeur_311,
Felis catus ENSFCAG00000022871 ortholog_one2one 1 retrogene
retro_fcat_2019,
Homo sapiens ENSG00000118680 ortholog_one2one 4 retrogenes
retro_hsap_1487, retro_hsap_3129, retro_hsap_3451, retro_hsap_3985,
Gorilla gorilla ENSGGOG00000004051 ortholog_one2one 4 retrogenes
retro_ggor_1139, retro_ggor_1140, retro_ggor_2330, retro_ggor_2675,
Myotis lucifugus ENSMLUG00000005189 ortholog_one2one 2 retrogenes
retro_mluc_706, retro_mluc_947,
Monodelphis domestica ENSMODG00000021464 ortholog_one2one 1 retrogene
retro_mdom_987,
Mustela putorius furo ENSMPUG00000005011 ortholog_one2one 1 retrogene
retro_mputfur_294,
Mus musculus ENSMUSG00000034868 ortholog_one2one 2 retrogenes
retro_mmus_1483, retro_mmus_1539,
Nomascus leucogenys ENSNLEG00000006907 ortholog_one2one 3 retrogenes
retro_nleu_1709, retro_nleu_1906, retro_nleu_2250,
Otolemur garnettii ENSOGAG00000029777 ortholog_one2one 2 retrogenes
retro_ogar_2409, retro_ogar_857,
Pongo abelii ENSPPYG00000010971 within_species_paralog 1 retrogene
retro_pabe_972,
Pan troglodytes ENSPTRG00000009836 ortholog_one2one 4 retrogenes
retro_ptro_1006, retro_ptro_2118, retro_ptro_2340, retro_ptro_2705,
Rattus norvegicus ENSRNOG00000015733 ortholog_one2one 2 retrogenes
retro_rnor_1614, retro_rnor_2718,
Tarsius syrichta ENSTSYG00000010418 ortholog_one2one 9 retrogenes
retro_tsyr_1034, retro_tsyr_1265, retro_tsyr_1320, retro_tsyr_1464, retro_tsyr_1961, retro_tsyr_2054, retro_tsyr_277, retro_tsyr_391, retro_tsyr_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1236 81.68 76.16
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2. retro_pabe_2585 89.66 100.00
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3. retro_pabe_3026 90.53 98.26
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Download FASTA sequences of all ENSPPYG00000009032 retrocopies