Parental gene:

PSMD8, ENSPPYG00000009931

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 [Source:HGNC Symbol;Acc:9566]
Organism:Orangutan (Pongo abelii)
Coordinates:19:39240663..39249515(+)


>ENSPPYG00000009931
ATGTTCATTAAGGGCAGGGCTCCGAGGGCGCCACCTCGAGAGCGACAGCGGGCTACCCGGGGCGGGCTGAGGCAAGTTGT
AGCCCCGCCCCGGGCCTTGGGCTCCACCTCTCGGCCCCACTTCCGCCGTGCGAGCGTTTGTAGGCGGTGCTGCCGTAAAT
CAAGCGGTCGGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCGGGCTTCTCAAGCTCCGGGCCC
GCGGCGACCTCGGGCGCTGTCCTGCAGGCCGCGACCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGTAAAAGCCC
CAATCTTAGCAAGTGCGGAGAAGAGCTGGGCCGACTCAAGCTAGTTCTTCTGGAGCTTAACTTCTTACCAACCACAGGGA
CCAAGCTGACCAAACAGCAGCTAATTCTGGCCCGTGACATACTGGAGATCGGGGCCCAATGGAGCATCCTACGCAAGGAC
ATCCCCTCCTTCGAGCGCTACATGGCCCAGCTCAAATGCTACTACTTTGATTACAAGGAACAGCTCCCTGAGTCAGCCTA
TATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTATCTCAGAACCGGGTGGCTGAGTTCCACACGGAGTTGGAGC
GGCTGCCTGCCAAGGACATCCAGACCAATGTCTACATCAAGCACCCTGTGTCCCTGGAGCAATACCTGATGGAGGGCAGC
TACAACAAAGTGTTCCTGGCCAAGGGTAACATCCCTGCCGAGAGCTACACCTTCTTCATTGACATCCTGCTGGACACTAT
CAGGGATGAGATCGCTGGGTGCATCGAGAAGGCCTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCTTCA
ACACACCCAAAAAGATGACAGACTACGCCAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCCAGC
CAGCAGCAGAAGCCAGAAGACACCACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNN

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .34 RPM
SRP007412_cerebellum 27 .00 RPM
SRP007412_heart 17 .46 RPM
SRP007412_kidney 33 .01 RPM
SRP007412_liver 26 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000099341 ortholog_one2one 1 retrogene
retro_hsap_456,
Monodelphis domestica ENSMODG00000013151 possible_ortholog 1 retrogene
retro_mdom_58,
Nomascus leucogenys ENSNLEG00000016876 ortholog_one2one 1 retrogene
retro_nleu_878,
Pan troglodytes ENSPTRG00000010926 ortholog_one2one 1 retrogene
retro_ptro_343,
Ictidomys tridecemlineatus ENSSTOG00000014464 ortholog_one2one 1 retrogene
retro_itri_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_277 85.23 74.57
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Download FASTA sequences of all ENSPPYG00000009931 retrocopies