Parental gene: | PSMD8, ENSPTRG00000010926 |
| Aliases: | None |
| Description: | Pan troglodytes proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8), mRNA. [Source:RefSeq mRNA;Acc:NM_001251986] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:43582015..43591304(+) |
>ENSPTRG00000010926
ATGTTCATTAAGGGCAGGGCTCCGAGGGCGCCACCTCGAGAGCGACGGCGGGCTACCCGGGGCGGGCTGAGGCAGGTTGT
AGCCCCGCCCCGGGCCTTGGGCTCCACCTCTCGGCCCCACTTCCGCCGGGCAAGCGTTTGTAGGCGGCGCTGCCGTAAAT
CAGGCGGTCTGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCAGGCTTCTCGAGCTCCGGGCCC
GCGGCAACCTCGGGCGCTGTCCTGCAGGCCGCGACCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGTAAAAGCCC
CAATCTTAGCAAGTGCGGGGAAGAGCTGGGTCGACTCAAGCTAGTTCTTCTGGAGCTCAACTTCTTGCCAACCACAGGGA
CCAAGCTGACCAAACAGCAGCTAATTCTGGCCCGTGACATACTGGAGATCGGGGCCCAATGGAGCATCCTACGCAAGGAC
ATCCCCTCCTTCGAGCGCTACATGGCCCAGCTCAAATGCTACTACTTTGATTACAAGGAGCAGCTCCCCGAGTCAGCCTA
TATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTCCACACGGAGTTGGAGC
GGCTGCCTGCCAAGGACATCCAGACCAATGTCTACATCAAGCACCCCGTGTCCCTGGAGCAATACCTGATGGAGGGCAGC
TACAACAAAGTGTTCCTGGCCAAGGGTAACATCCCCGCCGAGAGCTACACCTTCTTCATTGACATCCTGCTCGACACTAT
CAGGGATGAGATCGCTGGGTGCATCGAGAAGGCTTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCTTCA
ACACACCCAAAAAGATGACAGACTACGCCAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCCAGC
CAGCAGCAGAAGCCGGAAGACACCACCATTCCCTCCACAGAACTGGCCAAACAGGTCATCGAGTATGCCCGGCAGCTGGA
GATGATCGTCTGA
ATGTTCATTAAGGGCAGGGCTCCGAGGGCGCCACCTCGAGAGCGACGGCGGGCTACCCGGGGCGGGCTGAGGCAGGTTGT
AGCCCCGCCCCGGGCCTTGGGCTCCACCTCTCGGCCCCACTTCCGCCGGGCAAGCGTTTGTAGGCGGCGCTGCCGTAAAT
CAGGCGGTCTGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCAGGCTTCTCGAGCTCCGGGCCC
GCGGCAACCTCGGGCGCTGTCCTGCAGGCCGCGACCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGTAAAAGCCC
CAATCTTAGCAAGTGCGGGGAAGAGCTGGGTCGACTCAAGCTAGTTCTTCTGGAGCTCAACTTCTTGCCAACCACAGGGA
CCAAGCTGACCAAACAGCAGCTAATTCTGGCCCGTGACATACTGGAGATCGGGGCCCAATGGAGCATCCTACGCAAGGAC
ATCCCCTCCTTCGAGCGCTACATGGCCCAGCTCAAATGCTACTACTTTGATTACAAGGAGCAGCTCCCCGAGTCAGCCTA
TATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTCCACACGGAGTTGGAGC
GGCTGCCTGCCAAGGACATCCAGACCAATGTCTACATCAAGCACCCCGTGTCCCTGGAGCAATACCTGATGGAGGGCAGC
TACAACAAAGTGTTCCTGGCCAAGGGTAACATCCCCGCCGAGAGCTACACCTTCTTCATTGACATCCTGCTCGACACTAT
CAGGGATGAGATCGCTGGGTGCATCGAGAAGGCTTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCTTCA
ACACACCCAAAAAGATGACAGACTACGCCAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCCAGC
CAGCAGCAGAAGCCGGAAGACACCACCATTCCCTCCACAGAACTGGCCAAACAGGTCATCGAGTATGCCCGGCAGCTGGA
GATGATCGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 78 .27 RPM |
| SRP007412_cerebellum | 62 .73 RPM |
| SRP007412_heart | 70 .42 RPM |
| SRP007412_kidney | 80 .42 RPM |
| SRP007412_liver | 76 .73 RPM |
| SRP007412_testis | 59 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000099341 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013151 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016876 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009931 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014464 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_343 | 84.51 | 80.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010926 retrocopies