Parental gene: | PSMD8, ENSSTOG00000014464 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 [Source:HGNC Symbol;Acc:9566] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393611.1:1137528..1144218(+) |
>ENSSTOG00000014464
ATGTTCATTAAGGGCAGGGCTTCCGGGACTTCTCCCAGAGAGCTACGGCTCGCCACCCGCGGCGGGGAGAGGCGGGCAGT
CGTAGCTCCGCCCCCGCCCTTGGGCTCCACCTCCCAGCCCCATTTCCGCCGGGCGAAAGTCCGTAGGCGCCGCTGCCGTA
AACGAGGCCGGCGGTTCGCCAAATCACGGAAGATGGCGGCCGCGACCATGAACGGAACGACAGGCATCTCGAGCTCCGGG
TCTGCGGCGGCCTCGGGCGCTATCCTGCAGGCCGCGGCCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGGAAAAG
CCCCAATCTTAGCAAATGCGGAGAAGAGCTGGGCCGCCTCAAGCTGGTTCTGCTGGAGCTTAACTTCCTGCCAACCACAG
GGACCAAGCTGACCAAACAACAGCTCATTCTGGCCCGTGACATATTGGAGATCGGGGCCCAGTGGAGCATCCTTCGCAAG
GACATCCCCTCCTTCGAGCGCTACATGGCTCAGCTCAAGTGCTACTACTTTGATTACAAGGAGCAGCTCCCCGAGTCAGC
CTACATGCACCAGCTTTTGGGCCTCAATCTTCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTTCATACAGAGTTGG
AGCGCCTACCTGCCAAGGATATCCAGACCAATGTCTACATCAAGCACCCTGTGTCCCTTGAGCAGTACCTGATGGAGGGC
AGCTACAACAAGGTGTTCCTGGCCAAAGGCAACATCCCTGCTGAGAGCTACACCTTCTTTATCGACATTCTGCTGGACAC
TATCAGGGACGAGATTGCAGGGTGCATTGAGAAGGCCTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCT
TCAACACACCCAAAAAGATGACAGACTACGCTAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCC
AGCCAGCAGCAGAAGCCAGAAGACACCATCATCCCCTCTACAGAACTGGCCAAGCAAGTCATCGAGTATGCCCGGCAGCT
GGAGATGATTGTCTGA
ATGTTCATTAAGGGCAGGGCTTCCGGGACTTCTCCCAGAGAGCTACGGCTCGCCACCCGCGGCGGGGAGAGGCGGGCAGT
CGTAGCTCCGCCCCCGCCCTTGGGCTCCACCTCCCAGCCCCATTTCCGCCGGGCGAAAGTCCGTAGGCGCCGCTGCCGTA
AACGAGGCCGGCGGTTCGCCAAATCACGGAAGATGGCGGCCGCGACCATGAACGGAACGACAGGCATCTCGAGCTCCGGG
TCTGCGGCGGCCTCGGGCGCTATCCTGCAGGCCGCGGCCGGCATGTACGAGCAACTCAAGGGCGAGTGGAACCGGAAAAG
CCCCAATCTTAGCAAATGCGGAGAAGAGCTGGGCCGCCTCAAGCTGGTTCTGCTGGAGCTTAACTTCCTGCCAACCACAG
GGACCAAGCTGACCAAACAACAGCTCATTCTGGCCCGTGACATATTGGAGATCGGGGCCCAGTGGAGCATCCTTCGCAAG
GACATCCCCTCCTTCGAGCGCTACATGGCTCAGCTCAAGTGCTACTACTTTGATTACAAGGAGCAGCTCCCCGAGTCAGC
CTACATGCACCAGCTTTTGGGCCTCAATCTTCTCTTCCTGCTGTCCCAGAACCGGGTGGCTGAGTTTCATACAGAGTTGG
AGCGCCTACCTGCCAAGGATATCCAGACCAATGTCTACATCAAGCACCCTGTGTCCCTTGAGCAGTACCTGATGGAGGGC
AGCTACAACAAGGTGTTCCTGGCCAAAGGCAACATCCCTGCTGAGAGCTACACCTTCTTTATCGACATTCTGCTGGACAC
TATCAGGGACGAGATTGCAGGGTGCATTGAGAAGGCCTACGAGAAAATCCTTTTCACTGAGGCCACCCGGATCCTCTTCT
TCAACACACCCAAAAAGATGACAGACTACGCTAAGAAGCGAGGGTGGGTCCTGGGCCCCAACAACTACTACAGTTTTGCC
AGCCAGCAGCAGAAGCCAGAAGACACCATCATCCCCTCTACAGAACTGGCCAAGCAAGTCATCGAGTATGCCCGGCAGCT
GGAGATGATTGTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005931 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013316 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000099341 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006596 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009902 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000031219 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013151 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016876 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004068 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009931 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010926 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002956 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_10 | 90.28 | 82.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000014464 retrocopies