Parental gene: | CXADR, ENSPPYG00000011295 |
| Aliases: | None |
| Description: | coxsackievirus and adenovirus receptor homolog precursor [Source:RefSeq peptide;Acc:NP_001127547] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 21:17259066..17316848(+) |
>ENSPPYG00000011295
ATGGCGCTCCTGCTGCGCTTCGTGCTCCTGTGCGGAGTCGCGGATTTTGCCAGAAGTTTGAGTATCACTACTCCTGAAGA
GATGATTGAAAAAGCCAAAGGGGAAACTGCCTATCTGCCATGCAAATTTACGCTTAGTCCCGAAGACCAGGGACCGCTGG
ACATCGAGTGGCTGATATCACCAGCGGATAATCAGAAGGTGGATCAAGTGATTATTTTATATTCTGGAGACAAAATTTAT
GATGACTACTATCCAGATCTGAAAGGCCGAGTACATTTTACGAGTAATGATCTCAAATCTGGTGATGCATCAATAAATGT
AACGAATTTACAGCTGTCAGATATTGGCACATATCAGTGCAAAGTGAAAAAAGCTCCTGGTGTTGCAAATAAGAAGATTC
ATCTGGTAGTTCTTGTTAAGCCTTCAGGTGCAAGATGTTACGTTGATGGATCAGAAGAAATTGGAAGTGACTTTAAACTA
AAATGTGAACCAAAAGAAGGTTCACTTCCATTACAGTATGAGTGGCAAAAATTGTCTGACTCACAGAAAATGCCCACTTT
GTGGTTAGCAGAAATGACTTCATCTGTTATATCTGTAAAAAATGCCTCTTCAGAGTACTCTGGGACATACAGCTGTACAG
TCAGAAACAGAGTGGGCTCTGATCAGTGCCTGTTGCGTCTAAACGTTGTCCCTCCTTCAAATAAAGCTGGACTAATTGCA
GGAGCCATTATAGGAACTTTGCTTGCTCTGGCGCTCATTGGTCTTATCATCTTTTGCTGTCGTAAAAAGCGCAGAGAAGA
AAAATACGAAAAGGAAGTTCATCACGATATCAGGGAAGATGTGCCACCTCCAAAGAGCCGTACGTCCACTGCCAGAAGCT
ACATCGGCAGTAATCATTCATCCCTGGGATCCATGTCTCCTTCCAACATGGAAGGATATTCCAAGACTCAGTATAACCAA
GTACCAAGTGAAGACTTTGAACGCACTCCTCAGAGTCCGACTCTCCCACCTGCTAAGGTAGCTGCCCCTAATCTAAGTCG
AATGGGCGCGATTCCTGTGATGATTCCAGCACAGAGCAAGGATGGGTCTATAGTATAG
ATGGCGCTCCTGCTGCGCTTCGTGCTCCTGTGCGGAGTCGCGGATTTTGCCAGAAGTTTGAGTATCACTACTCCTGAAGA
GATGATTGAAAAAGCCAAAGGGGAAACTGCCTATCTGCCATGCAAATTTACGCTTAGTCCCGAAGACCAGGGACCGCTGG
ACATCGAGTGGCTGATATCACCAGCGGATAATCAGAAGGTGGATCAAGTGATTATTTTATATTCTGGAGACAAAATTTAT
GATGACTACTATCCAGATCTGAAAGGCCGAGTACATTTTACGAGTAATGATCTCAAATCTGGTGATGCATCAATAAATGT
AACGAATTTACAGCTGTCAGATATTGGCACATATCAGTGCAAAGTGAAAAAAGCTCCTGGTGTTGCAAATAAGAAGATTC
ATCTGGTAGTTCTTGTTAAGCCTTCAGGTGCAAGATGTTACGTTGATGGATCAGAAGAAATTGGAAGTGACTTTAAACTA
AAATGTGAACCAAAAGAAGGTTCACTTCCATTACAGTATGAGTGGCAAAAATTGTCTGACTCACAGAAAATGCCCACTTT
GTGGTTAGCAGAAATGACTTCATCTGTTATATCTGTAAAAAATGCCTCTTCAGAGTACTCTGGGACATACAGCTGTACAG
TCAGAAACAGAGTGGGCTCTGATCAGTGCCTGTTGCGTCTAAACGTTGTCCCTCCTTCAAATAAAGCTGGACTAATTGCA
GGAGCCATTATAGGAACTTTGCTTGCTCTGGCGCTCATTGGTCTTATCATCTTTTGCTGTCGTAAAAAGCGCAGAGAAGA
AAAATACGAAAAGGAAGTTCATCACGATATCAGGGAAGATGTGCCACCTCCAAAGAGCCGTACGTCCACTGCCAGAAGCT
ACATCGGCAGTAATCATTCATCCCTGGGATCCATGTCTCCTTCCAACATGGAAGGATATTCCAAGACTCAGTATAACCAA
GTACCAAGTGAAGACTTTGAACGCACTCCTCAGAGTCCGACTCTCCCACCTGCTAAGGTAGCTGCCCCTAATCTAAGTCG
AATGGGCGCGATTCCTGTGATGATTCCAGCACAGAGCAAGGATGGGTCTATAGTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .31 RPM |
| SRP007412_cerebellum | 4 .01 RPM |
| SRP007412_heart | 17 .16 RPM |
| SRP007412_kidney | 6 .86 RPM |
| SRP007412_liver | 11 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000012975 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000154639 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002063 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000013795 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005309 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1273 | 93.42 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2776 | 96.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011295 retrocopies