Parental gene: | ENSPPYG00000013118 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:99224414..99269960(+) |
>ENSPPYG00000013118
ATGCCCGAAGATTTAGCTTTGGAGTCAAACCCTTCTGACCATCCAAGGGCAAGCACAATTTTCCTGAGCAAATCTCAAAC
GGATGTGCGAGAAAAGAGGAAGAGCAACCATTTAAACCATGTATCTCCAGGGCAGCTTACTAAAAAGTATAGCTCATGCT
CAACAATATTTCTAGATGACAGCACAGTCAGCCAGCCTAATCTTAGAACCACAGTAAAATGTGTGACCTTAGCAATATAT
TACCACATAAAGAACAGAGATGCAAATAGATCCCTGGATATTTTTGATGAGAGATCACATCCACTTACACGAGAAAAAGT
TCCAGAGGAATACTTTAAGCATGATCCTGAGCACAAATTTATTTACAGATTTGTTCGTACTCTTTTTAGTGCTGCACAGC
TAACAGCTGAATGTGCAATAGTAACTTTGGTTTACTTAGAAAGGCTTTTAACTTATGCTGAAATTGACATTTGTCCCACC
AACTGGAAAAGGATTGTTCTGGGAGCCATTCTTCTTGCCTCCAAGGTTTGGGACGATCAGGCTGTATGGAATGTGGACTA
CTGCCAGATCCTCAAGGACATTACAGTTGAGGACATGAATGAAATGGAAAGGCATTTTCTGGAGCTTCTTCAGTTTAATA
TTAATGTTCCTGCCAGTGTTTATGCCAAATACTACTTTGACCTTCGCTCCTTAGCAGATGACAACAACCTGAATTTTCTA
TTTGCTCCTCTTAGCAAAGAAAGAGCACAGAACCTAGAGGCTATTTCTAGATTGTGTGAAGACAAAGACTTATGTAGAGC
TGCTATGAGAAGGTCTTTCAGTGCTGATAACTTCATTGGTATTCAGCGCTCTAAAGCCATCCTCTCTTAA
ATGCCCGAAGATTTAGCTTTGGAGTCAAACCCTTCTGACCATCCAAGGGCAAGCACAATTTTCCTGAGCAAATCTCAAAC
GGATGTGCGAGAAAAGAGGAAGAGCAACCATTTAAACCATGTATCTCCAGGGCAGCTTACTAAAAAGTATAGCTCATGCT
CAACAATATTTCTAGATGACAGCACAGTCAGCCAGCCTAATCTTAGAACCACAGTAAAATGTGTGACCTTAGCAATATAT
TACCACATAAAGAACAGAGATGCAAATAGATCCCTGGATATTTTTGATGAGAGATCACATCCACTTACACGAGAAAAAGT
TCCAGAGGAATACTTTAAGCATGATCCTGAGCACAAATTTATTTACAGATTTGTTCGTACTCTTTTTAGTGCTGCACAGC
TAACAGCTGAATGTGCAATAGTAACTTTGGTTTACTTAGAAAGGCTTTTAACTTATGCTGAAATTGACATTTGTCCCACC
AACTGGAAAAGGATTGTTCTGGGAGCCATTCTTCTTGCCTCCAAGGTTTGGGACGATCAGGCTGTATGGAATGTGGACTA
CTGCCAGATCCTCAAGGACATTACAGTTGAGGACATGAATGAAATGGAAAGGCATTTTCTGGAGCTTCTTCAGTTTAATA
TTAATGTTCCTGCCAGTGTTTATGCCAAATACTACTTTGACCTTCGCTCCTTAGCAGATGACAACAACCTGAATTTTCTA
TTTGCTCCTCTTAGCAAAGAAAGAGCACAGAACCTAGAGGCTATTTCTAGATTGTGTGAAGACAAAGACTTATGTAGAGC
TGCTATGAGAAGGTCTTTCAGTGCTGATAACTTCATTGGTATTCAGCGCTCTAAAGCCATCCTCTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .49 RPM |
| SRP007412_cerebellum | 1 .22 RPM |
| SRP007412_heart | 1 .69 RPM |
| SRP007412_kidney | 2 .52 RPM |
| SRP007412_liver | 3 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002901 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000163249 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000020211 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000070871 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007131 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_76 | 92.31 | 98.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1345 | 54.46 | 73.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3766 | 90.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013118 retrocopies