Parental gene:

ABT1, ENSPPYG00000016335

Aliases:None
Description:activator of basal transcription 1 [Source:RefSeq peptide;Acc:NP_001125836]
Organism:Orangutan (Pongo abelii)
Coordinates:6:27721961..27725759(+)


>ENSPPYG00000016335
ATGGAGGCAGAGGAATCGGAGAAGGCCGCAACGGAGCAAGAGCCGCTGAAAGGGACAGAACAGACACTAGACGCGGAGGA
GGAGCAGGAGGAATCCGAAGACGCGGCCTGTGGTAGCAAGAAGCGGGTAGTGCCAGGTATTGTGTACCTGGGCCATATCC
CGCCGCGCTTCCGGCCCCTGCACGTCCGCAACCTTCTCAGCGCCTATGGCGAGGTCGGACGCGTCTTCTTTCAGGCTGAG
GACCGGTTCGTGAGACGCAAGAAGAAGGCGGCAGCAGCTGCCGGAGGAAAAAAGCGGTCCTACAGCAAGGACTACACCGA
GGGATGGGTGGAGTTCCGTGACAAGCGCATAGCCAAGCGCGTGGCGGCCAGTCTACACAACACGCCTATGGGTGCCCGCA
GGCGCAGCCCCTTCCGTTATGATCTTTGGAACCTCAAGTACTTGCACCGTTTCACCTGGTCCCACCTCAGCGAGCACCTT
GCCTTTGAGCGCCAGGTGCGCAGGCAGCGCTTGAGAGCGGAGGTTGCTCAGGCCAAGCGTGAGACCGACTTCTATCTTCA
AAGTGTGGAACGGGGACAACGCTTTCTTGCGGCCGATGGGGACCCTGCTCGCCCGGATGGCTCCTGGACATTTGCCCAGC
GTCCTACTGAGCAGGAACTGAGGGCCCGGAAAGCGGCACGGCCAGGGGGGCGTGAACGGGCTCGCCTGGTGACTGCCCAG
GACAAGGCACGCTCCAACAAAGGGCTCCTGGCCAGGATCTTTGGAGCCCCGCCACCCTCAGAGAGCATGGAGGGACCTTC
CCTTGTCAGGGACTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .52 RPM
SRP007412_cerebellum 8 .39 RPM
SRP007412_heart 4 .09 RPM
SRP007412_kidney 6 .53 RPM
SRP007412_liver 8 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005188 ortholog_one2one 1 retrogene
retro_chof_1748,
Cavia porcellus ENSCPOG00000008937 ortholog_one2one 1 retrogene
retro_cpor_1386,
Gorilla gorilla ENSGGOG00000024149 ortholog_one2many 1 retrogene
retro_ggor_2106,
Macaca mulatta ENSMMUG00000006914 ortholog_one2one 1 retrogene
retro_mmul_1959,
Otolemur garnettii ENSOGAG00000026316 ortholog_one2one 1 retrogene
retro_ogar_2895,
Rattus norvegicus ENSRNOG00000017585 ortholog_one2many 1 retrogene
retro_rnor_841,
Sarcophilus harrisii ENSSHAG00000003493 ortholog_one2many 1 retrogene
retro_shar_97,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2541 74.27 61.76
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Download FASTA sequences of all ENSPPYG00000016335 retrocopies