Parental gene:

Abt1, ENSRNOG00000017585

Aliases:None
Description:Activator of basal transcription 1 [Source:UniProtKB/Swiss-Prot;Acc:Q4KLM5]
Organism:Rat (Rattus norvegicus)
Coordinates:17:45800801..45802895(+)


>ENSRNOG00000017585
ATGGTGAAAGTAGGAAAGCTGGTGGAGGAGCAAAAGGCGGCGATGGAGGAAGAGAAAGAGGTGAATGCAGAGGCGGCGGA
GGAGCTGGAGGAGGCCGAGGAAGCGTCCTGCAACGGCAGCAAGAAGAAGGTAGTTCCGGGTATTGTGTACTTGGGCCACG
TCCCGCCGCGATTCCGGCCCCTGCACGTTCGCAACCTGCTCAGCGTCTACGGTGAGGTGGGACGCGTTTTCTTCCAGGCC
GAGGACCCCTTTGTGAGACGAAAAAAGAAGGCAGCCGCGGCTGCAGGAGGAAAGAAGGGAGCTAAATACAGCAAGGACTA
TACCGAAGGCTGGGTGGAGTTCCGAGACAAACGCATAGCCAAGCGAGTGGCAGCTAGTCTACATAACACACCCATGGGTG
CCCGCAAGCGCAGTCCCTTCCGTTATGACCTGTGGAACCTCAAGTATTTGCATCGTTTTACTTGGTCCCACCTCAGTGAA
CACCTTGCCTTTGAGCGCCAGGTACGAAGGCAACGCCTGAGAGCAGAGGTTGCCCAAGCGAAACGAGAGACTGACTTCTA
TCTTCGAAACGTAGAACAGGGACAACGCTTTCTTGCAGCTGATGGGGATGCTACTCGACCAAATAGCTCCTGGACATTTA
CTCAACGTCCCACTGAGCAGGAGCTGAGGGCCCAGAAAGGAGCACGGCCAGGAGGGCGGGAACGAGCTCGGCTGGCCACA
GTCCAGGACCAGGCCCGATCCAACAGAGGGCTACTTGCCAGGATCTTTGGGGCCTCTCTACTTGCAGAGAGCAGGAAAGA
ACCGTAG

Library Parental gene expression (RPM)
SRP017611_brain 11 .72 RPM
SRP017611_kidney 8 .30 RPM
SRP017611_liver 5 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005188 ortholog_one2many 1 retrogene
retro_chof_1748,
Cavia porcellus ENSCPOG00000008937 ortholog_one2many 1 retrogene
retro_cpor_1386,
Gorilla gorilla ENSGGOG00000024149 ortholog_many2many 1 retrogene
retro_ggor_2106,
Macaca mulatta ENSMMUG00000006914 ortholog_one2many 1 retrogene
retro_mmul_1959,
Otolemur garnettii ENSOGAG00000026316 ortholog_one2many 1 retrogene
retro_ogar_2895,
Pongo abelii ENSPPYG00000016335 ortholog_one2many 1 retrogene
retro_pabe_2541,
Sarcophilus harrisii ENSSHAG00000003493 ortholog_many2many 1 retrogene
retro_shar_97,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_841 72.41 74.25
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Download FASTA sequences of all ENSRNOG00000017585 retrocopies