Parental gene: | RALA, ENSPPYG00000017619 |
| Aliases: | None |
| Description: | v-ral simian leukemia viral oncogene homolog A (ras related) [Source:HGNC Symbol;Acc:9839] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:44347231..44437101(-) |
>ENSPPYG00000017619
ATGGCCGCAAATAAGCCCAAGGGTCAGAATTCTTTGGCCTTACACAAAGTCATCATGGTGGGCAGTGGTGGCGTGGGCAA
GTCAGCTCTGACTCTACAGTTCATGTACGATGAGTTTGTGGAGGACTATGAGCCTACCAAAGCAGACAGCTATCGGAAGA
AGGTAGTGCTAGATGGGGAGGAAGTACAGATCGATATCTTAGATACAGCTGGGCAGGAGGACTACGCTGCAATTAGAGAC
AACTACTTCCGAAGCGGGGAGGGGTTCCTCTGTGTTTTCTCTATTACAGAAATGGAATCCTTTGCAGCTACAGCTGACTT
CAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAATGTTCCATTTCTACTGGTTGGTAACAAATCAGATTTAGAAGATA
AAAGGCAGGTTTCTGTAGAAGAGGCAAAAAACAGAGCTGAGCAGTGGAATGTTAACTACGTGGAAACATCTGCTAAAACA
CGAGCTAATGTTGACAAGGTATTTTTTGATTTAATGAGAGAAATTCGAGCGAGAAAGATGGAAGACAGCAAAGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA
ATGGCCGCAAATAAGCCCAAGGGTCAGAATTCTTTGGCCTTACACAAAGTCATCATGGTGGGCAGTGGTGGCGTGGGCAA
GTCAGCTCTGACTCTACAGTTCATGTACGATGAGTTTGTGGAGGACTATGAGCCTACCAAAGCAGACAGCTATCGGAAGA
AGGTAGTGCTAGATGGGGAGGAAGTACAGATCGATATCTTAGATACAGCTGGGCAGGAGGACTACGCTGCAATTAGAGAC
AACTACTTCCGAAGCGGGGAGGGGTTCCTCTGTGTTTTCTCTATTACAGAAATGGAATCCTTTGCAGCTACAGCTGACTT
CAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAATGTTCCATTTCTACTGGTTGGTAACAAATCAGATTTAGAAGATA
AAAGGCAGGTTTCTGTAGAAGAGGCAAAAAACAGAGCTGAGCAGTGGAATGTTAACTACGTGGAAACATCTGCTAAAACA
CGAGCTAATGTTGACAAGGTATTTTTTGATTTAATGAGAGAAATTCGAGCGAGAAAGATGGAAGACAGCAAAGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .20 RPM |
| SRP007412_cerebellum | 12 .16 RPM |
| SRP007412_heart | 9 .30 RPM |
| SRP007412_kidney | 12 .60 RPM |
| SRP007412_liver | 11 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007630 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017413 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000006451 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000000259 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016059 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003055 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001028 | other_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004369 | within_species_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004751 | other_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019108 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000029741 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000020292 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000002810 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_945 | 87.50 | 84.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3148 | 85.71 | 57.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3208 | 85.71 | 57.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000017619 retrocopies