Parental gene:

RALA, ENSSSCG00000029741

Aliases:None
Description:v-ral simian leukemia viral oncogene homolog A (ras related) [Source:HGNC Symbol;Acc:9839]
Organism:Pig (Sus scrofa)
Coordinates:18:59906524..59922109(-)


>ENSSSCG00000029741
ATGGCTGCAAACAAGCCCAAGGGCCAGAATTCCTTGGCCTTGCACAAGGTCATCATGGTGGGCAGCGGCGGCGTGGGCAA
GTCCGCTCTGACTCTGCAGTTCATGTACGACGAGTTTGTGGAGGACTACGAGCCGACGAAGGCAGACAGCTATCGGAAGA
AGGTGGTGCTGGACGGGGAGGAGGTGCAGATCGACATCCTGGACACGGCGGGCCAGGAGGACTACGCGGCCATCAGAGAC
AACTACTTCCGCAGCGGCGAGGGCTTCCTCTGCGTCTTCTCCATCACGGAGCTGGAGTCCTTCGCGGCCACCGCCGACTT
CAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAACGTTCCATTTCTGCTGGTTGGAAACAAATCAGATTTAGAAGATA
AAAGGCAGGTTTCTGTAGAAGAGGCCAAAACCAGAGCGGATCAGTGGAATGTTAACTACGTGGAAACATCCGCTAAAACG
CGAGCCAATGTCGACAAGGTGTTTTTTGATTTAATGAGGGAAATTCGAGCCCGAAAGATGGAAGACAGCAAAGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA

Library Parental gene expression (RPM)
SRP014902_placenta 83 .62 RPM
SRP014902_testis 73 .98 RPM
SRP018856_adipose 44 .59 RPM
SRP018288_kidney 42 .65 RPM
SRP018288_lung 48 .98 RPM
SRP018288_liver 22 .39 RPM
SRP018288_heart 33 .87 RPM
SRP035408_liver 63 .41 RPM
SRP035408_brain 143 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007630 ortholog_one2one 1 retrogene
retro_cjac_3313,
Dasypus novemcinctus ENSDNOG00000017413 ortholog_one2one 1 retrogene
retro_dnov_573,
Homo sapiens ENSG00000006451 ortholog_one2one 2 retrogenes
retro_hsap_1136, retro_hsap_3707,
Macropus eugenii ENSMEUG00000000259 ortholog_one2one 1 retrogene
retro_meug_1638,
Macaca mulatta ENSMMUG00000016059 ortholog_one2one 2 retrogenes
retro_mmul_1706, retro_mmul_882,
Nomascus leucogenys ENSNLEG00000003055 ortholog_one2one 1 retrogene
retro_nleu_935,
Pongo abelii ENSPPYG00000017619 ortholog_one2one 3 retrogenes
retro_pabe_3148, retro_pabe_3208, retro_pabe_945,
Pan troglodytes ENSPTRG00000019108 ortholog_one2one 1 retrogene
retro_ptro_2511,
Sus scrofa ENSSSCG00000006753 within_species_paralog 1 retrogene
retro_sscr_520,
Sus scrofa ENSSSCG00000021148 other_paralog 1 retrogene
retro_sscr_1125,
Sus scrofa ENSSSCG00000030014 other_paralog 2 retrogenes
retro_sscr_435, retro_sscr_909,
Ictidomys tridecemlineatus ENSSTOG00000020292 ortholog_one2one 2 retrogenes
retro_itri_1314, retro_itri_1315,
Vicugna pacos ENSVPAG00000002810 ortholog_one2one 1 retrogene
retro_vpac_211,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_634 65.04 58.25
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Download FASTA sequences of all ENSSSCG00000029741 retrocopies