Parental gene:

AAED1, ENSPPYG00000019418

Aliases:None
Description:AhpC/TSA antioxidant enzyme domain containing 1 [Source:HGNC Symbol;Acc:16881]
Organism:Orangutan (Pongo abelii)
Coordinates:9:92626865..92643534(-)


>ENSPPYG00000019418
ATGGCCGCGCCCGCCCCGGTCACGCGGCAGGTTAGCGGCGGCGCCGCCCTGGTCCCGGCCCCAAGCGGCCCCGACAGCGG
GCAGCCCCTGGCGGCCGCCGTGGCCGAGCTGCCGGTGCTGGACGCCCGCGGGCAGCGGGTACCGTTCGGCGCGTTGTTCC
GGGAGCGCCGCGCCGTGGTGGTGTTCGTGCGGCATTTCCTGTGTTACATCTGCAAGGAATACGTAGAGGATCTGGCCAAA
ATCCCCAAGAGTTTCTTACAAGAAGCAAATGTCACCCTTATAGTGATTGGACAGTCATCCTACCATCATATTGAGCCTTT
TTGCAAACTGACTGGATATTCTCATGAAATCTATGTCGATCCTGAGAGAGAAATTTATAAAAGATTGGGAATGAAAAGAG
GTGAAGAAATTGCCTCCTCAGGACAGAGCCCCCACGTAAAATCAAATCTACTCTCAGGAAGCCTTCGGAGCCTGTGGCGG
GCAGTGACTGGCCCTCTCTTTGATTTTCAAGGAGACCCAGCTCAGCAAGGTGGAACCCTCATTTTAGGTCCAGGTAACAA
CATCCATTTTATACACCGCGATAGGAATAGGTTGGATCACAAACCTATCAACTCTGTTTTACAGCTTGTAGGAGTTCAGC
ATGTGAACTTTACAAACGGACCTTCAGTTATCAATGTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .03 RPM
SRP007412_cerebellum 7 .66 RPM
SRP007412_heart 21 .92 RPM
SRP007412_kidney 9 .31 RPM
SRP007412_liver 5 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006422 ortholog_one2many 1 retrogene
retro_chof_1792,
Choloepus hoffmanni ENSCHOG00000007723 ortholog_one2many 7 retrogenes
retro_chof_1026, retro_chof_1037, retro_chof_1808, retro_chof_2079, retro_chof_2149, retro_chof_2642, retro_chof_811,
Callithrix jacchus ENSCJAG00000005509 ortholog_one2one 1 retrogene
retro_cjac_4168,
Dasypus novemcinctus ENSDNOG00000024562 ortholog_one2one 4 retrogenes
retro_dnov_1226, retro_dnov_1419, retro_dnov_1519, retro_dnov_1871,
Homo sapiens ENSG00000158122 ortholog_one2one 1 retrogene
retro_hsap_4843,
Macaca mulatta ENSMMUG00000008295 ortholog_one2many 1 retrogene
retro_mmul_2586,
Otolemur garnettii ENSOGAG00000017058 ortholog_one2one 1 retrogene
retro_ogar_1866,
Procavia capensis ENSPCAG00000003177 ortholog_one2one 1 retrogene
retro_pcap_269,
Pan troglodytes ENSPTRG00000021156 ortholog_one2one 1 retrogene
retro_ptro_3227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3765 77.31 95.13
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Download FASTA sequences of all ENSPPYG00000019418 retrocopies