Parental gene:

ENSPPYG00000025821

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:7:35979251..35993388(+)


>ENSPPYG00000025821
ATGAAGTTTCGGGCCAAGATCGTGGACGGCGCCTGTCTGAACCACTTCACACGAATCAGTAACATGATAGCCAAGCTTGC
CAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCTTTGTGACAAGCTGGCTAATGGAGGGGTGAGCA
TGTGGTGTGAGCTGGAACAGGAGAACTTCTTCAACGAATTTCAAATGGAGGGTGTCTCTGCAGAAAACAATGAGATTTAT
TTAGAGCTAACATCGGAAAACTTATCTCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAA
TAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGCTGTTATCTATGTCAAGCAGTAGCCGCATTGTGACACATGACATCC
CCGTAAAGGTGATTCCTAGGAAATTGTGGAAGGACTTACAAGAACCAGTGGTCCCAGATCCTGATGTTAGTATTTATTTA
CCAGTCTTGAAGACTATGAAGAGTGTTGTGGAAAAAATGAAAAACATCAGCAATCACCTTGTTATTGAAGCAAACCTAGA
TGGAGAATTGAATTTGAAAATAGAAACTGAATTAGTATGTGTTACAACTCATTTTAAAGATCTTGGAAATCCTCCTTTAG
CCTCTGAAAGCACCCAAAAGAACAGAAACGTGGAACACATGGCTGAAGTGCACATAGATATTAGGAAGCTCTTACAGTTT
CTTGCTGGACAACAAGTAAATCCCACAAAGGCCTTATGCAATATTGTGAGTAACAAGATGGTGCATTTTGATCTGCTTCA
TGAAGACGTCTCCCTTCAGTATTTCATCCCTGCGCTG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .66 RPM
SRP007412_cerebellum 1 .09 RPM
SRP007412_heart 1 .14 RPM
SRP007412_kidney 1 .76 RPM
SRP007412_liver 1 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001764 ortholog_one2many 4 retrogenes
retro_chof_1438, retro_chof_1958, retro_chof_2084, retro_chof_898,
Dipodomys ordii ENSDORG00000006582 ortholog_many2many 1 retrogene
retro_dord_182,
Echinops telfairi ENSETEG00000009941 ortholog_one2many 2 retrogenes
retro_etel_1764, retro_etel_1797,
Nomascus leucogenys ENSNLEG00000004497 ortholog_one2many 1 retrogene
retro_nleu_2321,
Oryctolagus cuniculus ENSOCUG00000027263 ortholog_one2many 1 retrogene
retro_ocun_761,
Otolemur garnettii ENSOGAG00000012683 ortholog_one2many 1 retrogene
retro_ogar_1,
Sorex araneus ENSSARG00000012348 ortholog_one2many 1 retrogene
retro_sara_391,
Ictidomys tridecemlineatus ENSSTOG00000027204 ortholog_one2many 1 retrogene
retro_itri_151,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_151 50.54 100.00
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Download FASTA sequences of all ENSPPYG00000025821 retrocopies