Parental gene:

PAPOLA, ENSPTRG00000006704

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:96125310..96191211(+)


>ENSPTRG00000006704
ATGCCGTTTCCAGTTACAACACAGGGATCACAACAAACACAACCGCCACAGAAGCACTATGGCATTACTTCTCCTATCAG
CTTAGCAGCCCCCAAGGAGACTGACTGCGTACTTACACAGAAACTAATTGAGACATTGAAACCCTTTGGGGTTTTTGAAG
AGGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAACTAAATAACCTGGTAAAAGAGTGGATACGAGAAATCAGT
GAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACATTTGGATCTTACAGATTAGGAGT
GCATACAAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCT
ATGATAAGTTGAAATTACAGGAAGAAGTAAAAGATTTAAGAGCTGTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGT
TTTGATGGGATAGAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACAATTCCAGAAGATTTGGATCTACGAGATGA
CAGTCTGCTAAAAAATTTAGATATAAGATGTATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACATCTAG
TACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTATGGGCCAAACGCCACAACATCTATTCCAATATA
TTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAAC
TCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCA
ATCTTAATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATAC
CCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTAT
CACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATT
ATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACGCCTGGAATGGGTGGGCTTGGTGGAATCAAAAATCCGAATC
CTGGTTGGAAGCTTGGAGAAGAATGAATTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAA
TCCCGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGGTTAGTGTTTAAAAAAACAGAAAACTCTGAAAACCTCAGTG
TTGATCTCACCTATGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGAT
ATGAAAATTGCTGCAATGCATGTAAAAAGAAAGCAACTCCATCAACTACTACCTAATCATGTGCTTCAGAAAAAGAAAAA
GCATTCAACAGAAGGTGTCAAATTGACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCATGT
CTGTGCCTTCACCTACTAGTGCTACGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCT
CCAGCTGTAACAGCAGCATCTGTGACCAACATACAGGCTACTGAAGTTTCTGTGCCACAAGTAAATTCCAGTGAAAGCTC
AGGGGGTACATCGAGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCTCCACCACCAAAGCCTACGGTCTCCA
GAGTTGTTTCTTCAACACGTCTGGTAAACCCACCACCTAGATCTTCAGGAAATGCAGCAACTTCAGGAAATGCAGCAACA
AAAATACCTACTCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAAGAGAGTCCCAAGAAAACCAAAACAGA
AGAGGATGAAACAAGTGAAGATGCTAACTGTCTTGCTTTGAGTGGACATGATAAAACAGAAGCAAAGGAACAACTTGATA
CAGAGACAAGTACAACTCAATCAGAAACTATTCAGACAGCGGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTACAGAC
CTTTCTGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 50 .12 RPM
SRP007412_cerebellum 56 .89 RPM
SRP007412_heart 81 .81 RPM
SRP007412_kidney 99 .90 RPM
SRP007412_liver 68 .41 RPM
SRP007412_testis 220 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014142 ortholog_one2one 1 retrogene
retro_amel_517,
Bos taurus ENSBTAG00000004054 ortholog_one2one 1 retrogene
retro_btau_1078,
Canis familiaris ENSCAFG00000017783 ortholog_one2one 1 retrogene
retro_cfam_1783,
Callithrix jacchus ENSCJAG00000006512 ortholog_one2one 2 retrogenes
retro_cjac_1763, retro_cjac_543,
Homo sapiens ENSG00000090060 ortholog_one2one 1 retrogene
retro_hsap_30,
Gorilla gorilla ENSGGOG00000006287 ortholog_one2one 1 retrogene
retro_ggor_202,
Myotis lucifugus ENSMLUG00000010922 ortholog_one2one 1 retrogene
retro_mluc_1396,
Macaca mulatta ENSMMUG00000018610 ortholog_one2one 1 retrogene
retro_mmul_1675,
Monodelphis domestica ENSMODG00000012887 ortholog_one2many 2 retrogenes
retro_mdom_1714, retro_mdom_1916,
Mustela putorius furo ENSMPUG00000003054 ortholog_one2one 1 retrogene
retro_mputfur_1375,
Mus musculus ENSMUSG00000021111 possible_ortholog 1 retrogene
retro_mmus_37,
Nomascus leucogenys ENSNLEG00000000625 ortholog_one2one 1 retrogene
retro_nleu_2771,
Otolemur garnettii ENSOGAG00000004611 ortholog_one2one 1 retrogene
retro_ogar_987,
Pongo abelii ENSPPYG00000006128 ortholog_one2one 1 retrogene
retro_pabe_3113,
Pteropus vampyrus ENSPVAG00000013925 ortholog_one2one 1 retrogene
retro_pvam_360,
Vicugna pacos ENSVPAG00000006464 ortholog_one2one 1 retrogene
retro_vpac_378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2595 86.08 83.89
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000006704 retrocopies