Parental gene:

CLK3, ENSPTRG00000007278

Aliases:None
Description:Pan troglodytes CDC-like kinase 3 (CLK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001246509]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:72186978..72202053(+)


>ENSPTRG00000007278
ATGCCCGTCCTCTCCGCGCGCAGGAGGGAGTTGGCGGACCACGCGGGGTCGGGGCGACGGAGCGGGCCCAGCCCCACGGC
CAGGTCGGGGCCCCACCTCTCGGCTCTGAGAGCCCAGCCGGCCCGGGCCGCGCACCTGTCAGGTCGGGGGACCTACGTGC
GCCGCGACACGGCGGGAGGCGGGCCGGGCCAGGCTCGTCCCCTCGGCCCTCCCGGAACTAGTCTCCTAGGCCGCGGCGCC
CGCCGAACCGGAAAGGGCTGGTGCCCCGGAGCCTTCGAGTCGGGGGCTAGAGCGGCCAGGCCTCCGAGCCGGATGCATCA
CTGTAAGCGATACCGCTCCCCTGAACCAGACCCGTACCTGAGCTACCGATGGAAGAGGAGGAGGTCCTACAGTCGGGAAC
ATGAAGGGAGACTGCGATACCCGTCCCGAAGGGAGCCTCCCCCACGAAGATCTCGGTCCAGAAGCCATGACCGCCTGCCC
TACCAGAGGAGGTACCGGGAGCGCCGTGACAGCGATACATACCGGTGTGAAGAGCGGAGCCCATCCTTTGGAGAGGACTA
CTATGGATCTTCACGTTCTCGTCATCGTCGGCGATCGCGGGAGAGGGGGCCATACCGGACCCGCAAGCATGCCCACCACT
GCCACAAACGCCGCACCAGGTCTTGTAGCAGCGCCTCCTCGAGAAGCCAACAGAGCAGTAAGCGCAGCAGCCGGAGTGTG
GAAGATGACAAGGAGGGTCACCTGGTGTGCCGGATCGGCGATTGGCTCCAAGAGCGATATGAGATTGTGGGGAACCTGGG
TGAAGGCACCTTTGGCAAGGTGGTGGAGTGCTTGGACCATGCCAGAGGGAAGTCTCAGGTTGCTCTGAAGATCATCCGCA
ACGTGGGCAAGTACCGGGAGGCTGCCCGGCTAGAAATCAACGTGCTCAAAAAAATCAAGGAGAAGGACAAAGAAAACAAG
TTCCTGTGTGTCTTGATGTCTGACTGGTTCAACTTCCACGGTCACATGTGCATCGCCTTTGAGCTCCTGGGCAAGAACAC
CTTTGAGTTCCTGAAGGAGAATAACTTCCAGCCTTACCCCCTACCACATGTCCGGCACATGGCCTACCAGCTCTGCCACG
CCCTTAGATTTCTGCATGAGAATCAGCTGACCCATACAGACTTGAAACCAGAGAACATCCTGTTTGTGAATTCTGAGTTT
GAAACCCTCTACAATGAGCACAAGAGCTGTGAGGAGAAGTCAGTGAAGAACACCAGCATCCGAGTGGCTGACTTTGGCAG
TGCCACATTTGACCATGAGCACCACACAACCATTGTGGCCACCCGTCACTATCGCCCGCCTGAGGTGATCCTTGAGCTGG
GCTGGGCACAGCCCTGTGACGTCTGGAGCATTGGCTGCATTCTCTTTGAGTACTACCGGGGCTTCACACTCTTCCAGACC
CACGAAAACCGAGAGCACCTGGTGATGATGGAGAAGATCCTAGGGCCCATCCCATCACACATGATCCACCGTACCAGGAA
GCAGAAATATTTCTACAAAGGGGGCCTAGTTTGGGATGAGAACAGCTCTGACGGCCGGTATGTGAAGGAGAACTGCAAAC
CTCTGAAGAGTTACATGCTCCAAGACTCCCTGGAGCACGTGCAGCTGTTTGACCTGATGAGGAGGATGTTAGAATTTGAC
CCTGCCCAGCGCATCACACTGGCCGAGGCCCTGCTGCACCCCTTCTTTGCTGGCCTGACCCCTGAGGAGCGGTCCTTCCA
CACCAGCCGCAACCCAAGCAGATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 27 .74 RPM
SRP007412_cerebellum 28 .07 RPM
SRP007412_heart 10 .99 RPM
SRP007412_kidney 24 .45 RPM
SRP007412_liver 16 .66 RPM
SRP007412_testis 34 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000179335 ortholog_one2one 1 retrogene
retro_hsap_540,
Macaca mulatta ENSMMUG00000011069 ortholog_one2one 1 retrogene
retro_mmul_457,
Pan troglodytes ENSPTRG00000001419 within_species_paralog 1 retrogene
retro_ptro_2604,
Pan troglodytes ENSPTRG00000017683 within_species_paralog 1 retrogene
retro_ptro_2859,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_405 65.19 55.72
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Download FASTA sequences of all ENSPTRG00000007278 retrocopies