Parental gene: | FECH, ENSPTRG00000010045 |
| Aliases: | None |
| Description: | Pan troglodytes ferrochelatase (FECH), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001038012] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 18:53628324..53664037(-) |
>ENSPTRG00000010045
ATGCGTTCACTCGGCGCAAACATGGCTGCGGCCCTGCGCGCCGCGGGCGTCCTGCTCCGCGATCCGCTGGTGTCCAGCAG
CTGGAGGGTCTATCAGCCATGGAGGTGGAAGTCAGTTGCAGCTGCAGCGGCCGCCACCACAGAAACAGCCCAGCATGCCC
AGGGTGCAAAACCTCAAGTTCAACCGCAGAAGAGGAAGCCGAAAACTGGAATATTAATGCTAAACATGGGAGGCCCTGAA
ACTCTCGGAGATGTTCACGACTTCCTTCTGAGACTCTTCTTGGACCGAGACCTCATGACGCTTCCTATTCAGAATAAGCT
GGCACCATTCATCGCCAAACGCCGAACCCCCAAGATTCAAGAGCAGTACCGCAGGATTGGAGGCGGATCCCCCATCAAGA
TATGGACTTCCAAGCAGGGAGAGGGCATGGTGAAGCTGCTGGATGAATTGTCCCCCAACACAGCCCCTCACAAATACTAT
ATTGGATTTCGGTACGTCCATCCTTTAACAGAAGAAGCAATTGAAGAGATGGAGAGAGATGGCCTAGAAAGGGCTATTGC
TTTCACACAGTATCCACAGTACAGCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTTACAGATACTATAATCAAGTGG
GACAGAAGCCCACGATGAAGTGGAGCACTATTGACAGGTGGCCCACACATCACCTCCTCATCCAGTGCTTTGCAGATCAT
ATTCTAAAGGAACTGGACCATTTTCCACTTGAGAAGAGAAGCGAGGTGGTCATTCTGTTTTCTGCTCACTCACTGCCGAT
GTCTGTGGTCAACAGAGGTGACCCATATCCTCAGGAGGTAAGCGCCACTGTCCAAAAAGTCATGGAAAGGCTGGAGTACT
GCAACCCCTACCGACTGGTGTGGCAATCCAAGGTTGGTCCAATGCCCTGGTTGGGTCCTCAAACAGACGAATCTATCAAA
GGGCTTTGTGAGAGGGGGAGGAAGAATATCCTCTTGGTTCCGATAGCGTTTACCAGTGACCATATTGAAACGCTGTATGA
GCTGGACATCGAGTACTCTCAAGTTTTAGCCAAGGAGTGTGGAGTTGAAAACATCAGAAGAGCTGAGTCTCTTAATGGAA
ATCCATTGTTCTCTAAG
ATGCGTTCACTCGGCGCAAACATGGCTGCGGCCCTGCGCGCCGCGGGCGTCCTGCTCCGCGATCCGCTGGTGTCCAGCAG
CTGGAGGGTCTATCAGCCATGGAGGTGGAAGTCAGTTGCAGCTGCAGCGGCCGCCACCACAGAAACAGCCCAGCATGCCC
AGGGTGCAAAACCTCAAGTTCAACCGCAGAAGAGGAAGCCGAAAACTGGAATATTAATGCTAAACATGGGAGGCCCTGAA
ACTCTCGGAGATGTTCACGACTTCCTTCTGAGACTCTTCTTGGACCGAGACCTCATGACGCTTCCTATTCAGAATAAGCT
GGCACCATTCATCGCCAAACGCCGAACCCCCAAGATTCAAGAGCAGTACCGCAGGATTGGAGGCGGATCCCCCATCAAGA
TATGGACTTCCAAGCAGGGAGAGGGCATGGTGAAGCTGCTGGATGAATTGTCCCCCAACACAGCCCCTCACAAATACTAT
ATTGGATTTCGGTACGTCCATCCTTTAACAGAAGAAGCAATTGAAGAGATGGAGAGAGATGGCCTAGAAAGGGCTATTGC
TTTCACACAGTATCCACAGTACAGCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTTACAGATACTATAATCAAGTGG
GACAGAAGCCCACGATGAAGTGGAGCACTATTGACAGGTGGCCCACACATCACCTCCTCATCCAGTGCTTTGCAGATCAT
ATTCTAAAGGAACTGGACCATTTTCCACTTGAGAAGAGAAGCGAGGTGGTCATTCTGTTTTCTGCTCACTCACTGCCGAT
GTCTGTGGTCAACAGAGGTGACCCATATCCTCAGGAGGTAAGCGCCACTGTCCAAAAAGTCATGGAAAGGCTGGAGTACT
GCAACCCCTACCGACTGGTGTGGCAATCCAAGGTTGGTCCAATGCCCTGGTTGGGTCCTCAAACAGACGAATCTATCAAA
GGGCTTTGTGAGAGGGGGAGGAAGAATATCCTCTTGGTTCCGATAGCGTTTACCAGTGACCATATTGAAACGCTGTATGA
GCTGGACATCGAGTACTCTCAAGTTTTAGCCAAGGAGTGTGGAGTTGAAAACATCAGAAGAGCTGAGTCTCTTAATGGAA
ATCCATTGTTCTCTAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 6 .54 RPM |
| SRP007412_cerebellum | 4 .52 RPM |
| SRP007412_heart | 8 .92 RPM |
| SRP007412_kidney | 18 .88 RPM |
| SRP007412_liver | 7 .69 RPM |
| SRP007412_testis | 5 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003873 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000066926 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005554 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022568 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008062 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003020 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009182 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1776 | 72.64 | 86.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010045 retrocopies