Parental gene:

CEP57L1, ENSPTRG00000018480

Aliases:None
Description:centrosomal protein 57kDa-like 1 [Source:HGNC Symbol;Acc:21561]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:110194813..110230138(+)


>ENSPTRG00000018480
ATGGATTCTGAATTAATGCATAGTATAGTAGGAAGCTATCATAAACCTCCAGAAAGAGTATTTGTTCCCTCATTCACCCA
GAATGAACCATCTCAGAATTGCCATCCTGCAAACTTAGAAGTTACCTCTCCTAAGATACTTCATAGCCCAAATAGCCAAG
CTCTTATTTTAGCCTTAAAAACTCTTCAGGAAAAAATTCGTCGTTTAGAGCTGGAGCGAACACAAGCTGAAGATAACCTG
AACATTCTTTCCAGAGAAGCAGCACAGTATAAGAAGGCCTTAGAGAATGAAACAAATGAGAGAAATCTGGCACACCAGGA
GCTGATAAAGCAGAAAAAAGATATAAGTATACAGTTAAGCTCAGCCCAGTCTCGTTGTACTCTTCTAGAGAAGCAACTAG
AATATACAAAGAGAATGGTTCTCAACGTAGAGCGAGAAAAGAACATGATCCTAGAACAACAGGCCCAGCTTCAGAGGGAA
AAAGAACAAGATCAGATGAAGCTGTATGCAAAACTTGAAAAGCTTGATGTCTTAGAAAAAGAGTGTTTTAGACTTACAAC
AACTCAGAAAACTGCTGAGGACAAGATTAAACATTTAGAAGAAAAACTTAAGGAAGAAGAACATCAGCGTAAGCTATTTC
AAGACAAAGCTTCTGAGCTTCAAACTGGACTTGAAATCAGTAAAATTATAATGTCTTCAGTTTCAAATCTAAAGCACTCC
AAGGAAAAGAAGAAATCTTCAAAGAAAACTAAATGTATAAAGAGACGACCACCTTGGCAAATTTGTTCAAAGTTTGGAGC
ACTGCCTTTTGTGGCTGAAAAGATGAGGCAACATCGTGACCCACATATCCTTCAGAAACCTTTTAACGTGACTGAGACTA
GATGTCTCCCCAAGCCTTCTAGAACAACTTCCTGGTGTAAAGCTATTCCTCCTGACTCAGAAAAGTCCATTTCCATTTGT
GACAATTTATCTGAACTTTTGATGGCAATGCAAGATGAGCTGGACCAAATGAGCATGGAGCACCAAGAACTACTGAAACA
AATGAAGGAAACTGAAAGTCATTCAGTCTGTGACGACATAGAATGTGAACTAGAGTGTTTACTCAAGAAAATGGAAATTA
AAGGAGAACAAATCTCCAAACTGAAGAAGCATCAAGACAGTGTCTGTAAACTGCAGCAAAAAGTTCAAAACTCAAAGATG
AGTGAAGCTTCAGGTATTCAGCAAGAAGACAGCTACCCTAAAGGATCAAAGAACATAAAACATAGCCCCAGAAAATGTTT
GACTGACACTAACCTTTTTCAGAAAAACAGCAGCTTTCATCCAATACGAGTTCATAATCTTCAAATGAAATTGAGAAGAG
ATGATATCATGTGGGAACAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .20 RPM
SRP007412_cerebellum 3 .69 RPM
SRP007412_heart 2 .65 RPM
SRP007412_kidney 5 .33 RPM
SRP007412_liver 2 .65 RPM
SRP007412_testis 35 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000183137 ortholog_one2one 1 retrogene
retro_hsap_591,
Gorilla gorilla ENSGGOG00000014982 ortholog_one2one 1 retrogene
retro_ggor_523,
Nomascus leucogenys ENSNLEG00000012502 ortholog_one2one 1 retrogene
retro_nleu_2216,
Otolemur garnettii ENSOGAG00000015479 ortholog_one2many 1 retrogene
retro_ogar_902,
Pongo abelii ENSPPYG00000016901 ortholog_one2one 1 retrogene
retro_pabe_598,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_434 94.37 85.00
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Download FASTA sequences of all ENSPTRG00000018480 retrocopies