Parental gene:

COPS5, ENSPTRG00000020317

Aliases:None
Description:COP9 signalosome subunit 5 [Source:HGNC Symbol;Acc:2240]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:64892890..64912349(-)


>ENSPTRG00000020317
ATGGCGGCGTCCGGGAGCGGTATGGCCCAGAAAACCTGGGAACTGGCCAACAACATGCAGGAAGCTCAGAGTATCGATGA
AATCTACAAATACGACAAGAAACAGCAGCAAGAAATCCTGGCGGCGAAGCCCTGGACTAAGGATCACCATTACTTTAAGT
ACTGCAAAATCTCAGCATTGGCTCTGCTGAAGATGGTGATGCATGCCAGATCGGGAGGCAACTTGGAAGTGATGGGTCTG
ATGCTAGGAAAGGTGGATGGTGAAACCATGATCATTATGGACAGTTTTGCTTTGCCTGTGGAGGGCACTGAAACCCGAGT
AAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCGAAACAGGTTGGCCGCCTTGAAAATGCAA
TCGGGTGGTATCATAGCCACCCTGGCTATGGCTGCTGGCTTTCTGGGATTGATGTTAGTACTCAGATGCTCAATCAGCAG
TTCCAGGAACCATTTGTAGCAGTGGTGATTGATCCAACAAGAACAATATCCGCAGGGAAAGTGAATCTTGGCGCCTTTAG
GACATACCCAAAGGGCTACAAACCTCCTGATGAAGGACCTTCTGAGTACCAGACTATTCCACTTAATAAAATAGAAGATT
TTGGTGTACACTGCAAACAATATTATGCCTTAGAAGTCTCATATTTCAAATCCTCTTTGGATCGCAAATTGCTTGAGCTG
TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCTTCTAGCTTGCTTACTAATGCAGACTATACCACTGGTCAGGTCTT
TGATTTGTCTGAAAAGTTAGAGCAGTCAGAAGCCCAGCTGGGACGAGGGAGTTTCATGTTGGGTTTAGAAACGCATGACC
GAAAATCAGAAGACAAACTTGCCAAAGCTACGAGAGACAGCTGTAAAACTACCATAGAAGCTATCCATGGATTGATGTCT
CAGGTTATTAAGGATAAACTGTTTAATCAAATTAACATCTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 22 .90 RPM
SRP007412_cerebellum 6 .35 RPM
SRP007412_heart 10 .73 RPM
SRP007412_kidney 12 .45 RPM
SRP007412_liver 6 .51 RPM
SRP007412_testis 22 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004632 ortholog_one2many 1 retrogene
retro_cjac_2454,
Homo sapiens ENSG00000121022 ortholog_one2one 1 retrogene
retro_hsap_3634,
Microcebus murinus ENSMICG00000011042 ortholog_one2one 1 retrogene
retro_mmur_834,
Monodelphis domestica ENSMODG00000007838 ortholog_one2one 1 retrogene
retro_mdom_1460,
Mustela putorius furo ENSMPUG00000010175 possible_ortholog 1 retrogene
retro_mputfur_397,
Nomascus leucogenys ENSNLEG00000010914 ortholog_one2one 1 retrogene
retro_nleu_815,
Pongo abelii ENSPPYG00000018648 ortholog_one2one 1 retrogene
retro_pabe_2980,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_638 99.70 100.00
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2. retro_ptro_2457 81.50 75.15
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Download FASTA sequences of all ENSPTRG00000020317 retrocopies