Parental gene: | UBQLN1, ENSPTRG00000021055 |
| Aliases: | None |
| Description: | Ubiquilin 1 [Source:UniProtKB/TrEMBL;Acc:K7BLR4] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:82313669..82361698(-) |
>ENSPTRG00000021055
ATGGCCGAGAGTGGTGAAAGCGGCGGTCCTCCGGGCTCCCAGGATAGTGCCGCCGGAGCCGAAGGTGCTGGCGCCCCCGC
GGCCGCTGCCTCCGCGGAGCCCAAAATCATGAAAGTCACCGTGAAGACCCCGAAGGAAAAGGAGGAATTCGCCGTGCCCG
AGAATAGCTCCGTCCAGCAGTTTAAGGAAGAAATCTCTAAACGTTTTAAATCACATACTGACCAACTTGTGTTGATATTT
GCTGGAAAAATTTTGAAAGATCAAGATACCTTGAGTCAGCATGGAATTCATGATGGACTTACTGTTCACCTTGTCATTAA
AACACAAAACAGGCCTCAGGATCATTCAGCTCAGCAAACAAATACAGCTGGAAGCAATGTTACTACATCATCAACTCCTA
ATAGTAACTCTACATCTGGTTCTGCTACTAGCAACCCTTTTGGTTTAGGTGGCCTTGGGGGACTTGCAGGTCTGAGTAGC
TTGGGTTTGAATACTACCAACTTCTCTGAACTACAGAGTCAGATGCAGCGACAACTTTTGTCTAACCCTGAAATGATGGT
CCAGATCATGGAAAATCCCTTTGTTCAGAGCATGCTCTCAAATCCTGACCTGATGAGACAGTTAATTATGGCCAATCCAC
AAATGCAGCAGTTGATACAGAGAAATCCAGAAATTAGTCATATGTTGAATAATCCAGATATAATGAGACAAACGTTGGAA
CTTGCCAGGAATCCAGCAATGATGCAGGAGATGATGAGGAACCAGGACCGAGCTTTGAGCAACGAAAGCATCCCAGGGGG
ATATAATGCTTTAAGGCGCATGTACACAGATATTCAGGAACCAATGCTGAGTGCTGCACAAGAGCAGTTTGGTGGTAATC
CATTTGCTTCCTTGGTGAGCAATACATCCTCTGGTGAAGGTAGTCAACCTTCCCGTACAGAAAATAGAGATCCACTACCC
AATCCATGGGCTCCACAGACTTCCCAGAGTTCATCAACTTCCAGCGGCACTGCCAGCACTGTGGGTGGCACTACTGGTAG
TACTGCCAGTGGCACTTCTGGGCAGAGTACTACTGCACCAAATTTGGTGCCTGGAGTAGGAGCTAGTATGTTCAACACAC
CAGGAATGCAGAGCTTGTTGCAACAAATAACTGAAAACCCACAACTTATGCAAAACATGTTGTCTGCCCCCTACATGAGA
AGCATGATGCAGTCACTAAGCCAGAATCCTGACCTTGCTGCACAGATGATGCTGAATAATCCCCTATTTGCTGGAAATCC
TCAGCTTCAAGAACAAATGAGACAACAGCTCCCAACTTTCCTCCAACAAATGCAGAATCCTGATACACTATCAGCAATGT
CAAACCCTAGAGCAATGCAGGCCTTGTTACAGATTCAGCAGGGTTTACAGACATTAGCAACGGAAGCCCCGGGCCTCATC
CCAGGGTTTACTCCTGGCTTGGGGGCATTAGGAAGCACTGGAGGCTCTTCGGGAACTAATGGATCTAACGCCACACCTAG
TGAAAACACAAGTCCCACAGCAGGAACCACTGAACCTGGACATCAGCAGTTTATTCAGCAGATGCTGCAGGCTCTTGCTG
GAGTAAATCCTCAGCTACAGAATCCAGAAGTCAGATTTCAGCAACAACTGGAACAACTCAGTGCAATGGGATTTTTGAAC
CGTGAAGCAAACTTGCAAGCTCTAATAGCAACAGGAGGTGATATCAATGCAGCTATTGAAAGGTTACTGGGCTCCCAGCC
ATCATAG
ATGGCCGAGAGTGGTGAAAGCGGCGGTCCTCCGGGCTCCCAGGATAGTGCCGCCGGAGCCGAAGGTGCTGGCGCCCCCGC
GGCCGCTGCCTCCGCGGAGCCCAAAATCATGAAAGTCACCGTGAAGACCCCGAAGGAAAAGGAGGAATTCGCCGTGCCCG
AGAATAGCTCCGTCCAGCAGTTTAAGGAAGAAATCTCTAAACGTTTTAAATCACATACTGACCAACTTGTGTTGATATTT
GCTGGAAAAATTTTGAAAGATCAAGATACCTTGAGTCAGCATGGAATTCATGATGGACTTACTGTTCACCTTGTCATTAA
AACACAAAACAGGCCTCAGGATCATTCAGCTCAGCAAACAAATACAGCTGGAAGCAATGTTACTACATCATCAACTCCTA
ATAGTAACTCTACATCTGGTTCTGCTACTAGCAACCCTTTTGGTTTAGGTGGCCTTGGGGGACTTGCAGGTCTGAGTAGC
TTGGGTTTGAATACTACCAACTTCTCTGAACTACAGAGTCAGATGCAGCGACAACTTTTGTCTAACCCTGAAATGATGGT
CCAGATCATGGAAAATCCCTTTGTTCAGAGCATGCTCTCAAATCCTGACCTGATGAGACAGTTAATTATGGCCAATCCAC
AAATGCAGCAGTTGATACAGAGAAATCCAGAAATTAGTCATATGTTGAATAATCCAGATATAATGAGACAAACGTTGGAA
CTTGCCAGGAATCCAGCAATGATGCAGGAGATGATGAGGAACCAGGACCGAGCTTTGAGCAACGAAAGCATCCCAGGGGG
ATATAATGCTTTAAGGCGCATGTACACAGATATTCAGGAACCAATGCTGAGTGCTGCACAAGAGCAGTTTGGTGGTAATC
CATTTGCTTCCTTGGTGAGCAATACATCCTCTGGTGAAGGTAGTCAACCTTCCCGTACAGAAAATAGAGATCCACTACCC
AATCCATGGGCTCCACAGACTTCCCAGAGTTCATCAACTTCCAGCGGCACTGCCAGCACTGTGGGTGGCACTACTGGTAG
TACTGCCAGTGGCACTTCTGGGCAGAGTACTACTGCACCAAATTTGGTGCCTGGAGTAGGAGCTAGTATGTTCAACACAC
CAGGAATGCAGAGCTTGTTGCAACAAATAACTGAAAACCCACAACTTATGCAAAACATGTTGTCTGCCCCCTACATGAGA
AGCATGATGCAGTCACTAAGCCAGAATCCTGACCTTGCTGCACAGATGATGCTGAATAATCCCCTATTTGCTGGAAATCC
TCAGCTTCAAGAACAAATGAGACAACAGCTCCCAACTTTCCTCCAACAAATGCAGAATCCTGATACACTATCAGCAATGT
CAAACCCTAGAGCAATGCAGGCCTTGTTACAGATTCAGCAGGGTTTACAGACATTAGCAACGGAAGCCCCGGGCCTCATC
CCAGGGTTTACTCCTGGCTTGGGGGCATTAGGAAGCACTGGAGGCTCTTCGGGAACTAATGGATCTAACGCCACACCTAG
TGAAAACACAAGTCCCACAGCAGGAACCACTGAACCTGGACATCAGCAGTTTATTCAGCAGATGCTGCAGGCTCTTGCTG
GAGTAAATCCTCAGCTACAGAATCCAGAAGTCAGATTTCAGCAACAACTGGAACAACTCAGTGCAATGGGATTTTTGAAC
CGTGAAGCAAACTTGCAAGCTCTAATAGCAACAGGAGGTGATATCAATGCAGCTATTGAAAGGTTACTGGGCTCCCAGCC
ATCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 84 .49 RPM |
| SRP007412_cerebellum | 99 .55 RPM |
| SRP007412_heart | 60 .39 RPM |
| SRP007412_kidney | 79 .08 RPM |
| SRP007412_liver | 59 .64 RPM |
| SRP007412_testis | 71 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014827 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000001435 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003609 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000004849 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000012687 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000015266 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000019110 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002822 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000015049 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000135018 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002036 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000002028 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000005312 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003306 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012947 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019323 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001444 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019282 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013462 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004696 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_93 | 78.88 | 85.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000021055 retrocopies