Parental gene:

DDX3Y, ENSPTRG00000022488

Aliases:None
Description:Pan troglodytes DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked (DDX3Y), mRNA. [Source:RefSeq mRNA;Acc:NM_001008986]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:Y:20407238..20422983(+)


>ENSPTRG00000022488
ATGAGTCATGTGGTGGTGAAAAATGACCCTGAACTGGACCAGCAGCTTGCTAATCTGGACCTGAACTCTGAAAAACAGAG
TGGAGGAGCAAGTAGAGCGAGCAAAGGGCGCTATATACCTCCTCACTTAAGGAACAGAGAAGCATCTAAAGGATTCCATG
ATAAAGACAGTTCAGGTTGGAGTTGCAGCAAAGATAAGGATGCATATAACAGTTTTGGGTCTCGAGATTCTAGAGGAAAG
CCTGGTTATTTCAGTGAACGTGGAAGTGGATCAAGGGGAAGATTTGATGATCGTGGACGGAGTGACTATGATGGTATTGG
CAATCGTGACAGACCTGGCTTTGGCAGATTTGAACGGAATGGACATAGTCGTTGGTGTGACAAGTCAGATGAAGATGATT
GGTCAAAACCACTTCCACCAAGTGAACGCTTGGAGCAAGAACTGTTTTCTGGAGGAAACACGGGGATTAACTTTGAGAAA
TATGATGATATACCAGTAGAGGCAACCGGCAGTAACTGTCCTCCACATATTGAGAATTTTGGCGATATTGACATGGGAGA
AATTATCATGGGGAACATTCAACTTACTCGCTATACTCGTCCTACTCCAGTGCAAAAACATGCCATTCCTATTATTAAGG
GAAAAAGAGACTTAATGGCTTGTGCCCAAACAGGATCTGGGAAAACTGCGGCATTTCTTTTACCCATACTGAGTCAGATA
TATACAGATGGTCCAGGAGAAGCTTTGAAGGCTGTGAAGGAAAATGGAAGGTACGGGCGCCGCAAACAATATCCAATATC
CTTGGTTTTAGCCCCAACAAGAGAATTGGCTGTACAGATCTATGAGGAAGCCAGAAAATTTTCCTACCGATCTAGAGTTC
GTCCTTGTGTAGTTTATGGTGGTGCTGATATTGGTCAGCAGATTCGGGACTTAGAACGTGGATGCCACTTGTTAGTAGCC
ACTCCAGGACGTCTAGTGGATATGATGGAAAGAGGAAAGATTGGATTAGACTTCTGCAAGTACTTAGTGTTGGATGAAGC
TGATAGGATGCTGGATATGGGATTTGAACCTCAGATACGTCGTATAGTTGAACAAGATACTATGCCACCAAAGGGCGTTC
GTCACACCATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTTGCTCGTGACTTTTTGGATGAATATATCTTT
TTGGCTGTAGGCAGAGTAGGCTCTACCTCTGAGAACATCACACAGAAAGTAGTTTGGGTGGAAGACTTAGATAAACGGTC
ATTTCTACTGGACATTTTAGGTGCAGCAGGGACGGATTCACTTACTTTAGTGTTTGTGGAGACCAAAAAGGGAGCAGATT
CCCTGGAGGATTTCTTATACCATGAAGGATATGCTTGTACTAGTATTCATGGAGACCGGTCACAGAGAGATCGAGAGGAG
GCCCTTCACCAGTTTCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACAGCTGTGGCAGCACGAGGACTAGACATTTCAAA
TGTGAGACATGTTATCAATTTTGATTTGCCAAGTGATATTGAAGAATATGTGCATCGTATTGGCCGTACAGGACGTGTAG
GAAACCTGGGCCTTGCCACCTCATTCTTTAATGAAAAAAATATCAATATTACAAAGGATTTGTTGGATCTTCTTGTAGAA
GCTAAACAAGAAGTGCCTTCTTGGTTGGAAAATATGGCTTATGAACACCAATACAAGGGTGGCAGTCGTGGACGATCTAA
AAGTAATAGATTCAGTGGAGGATTTGGTGCCAGAGACTATCGACAAAGTAGTGGTTCCAGCAGTTCTGGCTTTGGTGCTA
GTCGTGGAAGCAGCAGCCGCAGTGGTGGAGGTGGTTACGGCAACAGCAGAGGATTTGGTGGAGGTGGCTATGGAGGCTTC
TACAATAGTGATGGATATGGAGGAAATTATAACTCCCAGGGGGTTGACTGGTGGGGCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 40 .29 RPM
SRP007412_cerebellum 49 .04 RPM
SRP007412_heart 56 .11 RPM
SRP007412_kidney 68 .36 RPM
SRP007412_liver 26 .12 RPM
SRP007412_testis 323 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000035907 possible_ortholog 1 retrogene
retro_btau_1846,
Callithrix jacchus ENSCJAG00000009050 possible_ortholog 2 retrogenes
retro_cjac_1428, retro_cjac_4062,
Cavia porcellus ENSCPOG00000013557 possible_ortholog 2 retrogenes
retro_cpor_326, retro_cpor_53,
Homo sapiens ENSG00000215301 possible_ortholog 1 retrogene
retro_hsap_4709,
Mus musculus ENSMUSG00000000787 possible_ortholog 1 retrogene
retro_mmus_205,
Ornithorhynchus anatinus ENSOANG00000011274 ortholog_one2one 1 retrogene
retro_oana_64,
Rattus norvegicus ENSRNOG00000023383 possible_ortholog 1 retrogene
retro_rnor_1415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3130 78.84 51.82
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Download FASTA sequences of all ENSPTRG00000022488 retrocopies