Parental gene:

Ddx3x, ENSRNOG00000023383

Aliases:None
Description:ATP-dependent RNA helicase DDX3X [Source:RefSeq peptide;Acc:NP_001101716]
Organism:Rat (Rattus norvegicus)
Coordinates:X:11198744..11212381(-)


>ENSRNOG00000023383
ATGTTAGATATGGGGTTTGAACCTCAGATACGTAGAATAGTTGAACAAGACACTATGCCTCCAAAAGGTGTCCGCCACAC
TATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTGGCCCGTGATTTCTTAGATGAGTACATATTTCTGGCTG
TAGGAAGAGTTGGGTCTACTTCAGAGAACATCACACAAAAAGTGGTTTGGGTGGAGGAGATAGACAAAAGATCATTTCTG
CTTGACCTCCTAAATGCAACAGGCAAGGATTCCCTGACTCTAGTGTTTGTGGAGACCAAAAAGGGTGCAGATTCGCTGGA
GGATTTCTTATACCATGAAGGATATGCCTGTACCAGTATCCATGGAGACCGTTCTCAGAGAGATAGGGAAGAGGCCCTTC
ACCAGTTCCGCTCAGGAAAAAGCCCAATTCTAGTAGCTACAGCAGTAGCAGCAAGAGGACTGGATATTTCAAATGTGAAG
CATGTTATTAATTTTGACCTGCCTAGTGATATCGAAGAATATGTGCATCGCATAGGCCGTACAGGGCGTGTAGGAAACCT
TGGTCTTGCCACCTCATTCTTTAATGAAAGAAATATAAATATTACTAAGGATTTACTGGATCTTCTTGTTGAAGCAAAAC
AAGAAGTGCCATCTTGGTTGGAAAACATGGCTTTTGAACACCACTATAAGGGTAGCAGCCGTGGACGTTCTAAGAGCAGT
CGATTTAGTGGAGGGTTTGGTGCCAGAGACTATCGACAGAGTAGCGGCGCCAGCAGTTCCAGCTTCAGCAGCAGCCGCGC
AAGCAGCAGCCGGAGTGGTGGAGGTGGCCATGGCAGCAGCAGAGGATTTGGTGGAGGTGGCTATGGAGGCTTTTACAACA
GTGATGGATACGGAGGAAATTACAACTCCCAGGGGGTTGACTGGTGGGGAAACTGA

Library Parental gene expression (RPM)
SRP017611_liver 219 .40 RPM
SRP017611_kidney 362 .10 RPM
SRP017611_brain 196 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000035907 ortholog_one2many 1 retrogene
retro_btau_1846,
Callithrix jacchus ENSCJAG00000009050 ortholog_many2many 2 retrogenes
retro_cjac_1428, retro_cjac_4062,
Cavia porcellus ENSCPOG00000013557 ortholog_one2many 2 retrogenes
retro_cpor_326, retro_cpor_53,
Equus caballus ENSECAG00000009901 ortholog_one2many 1 retrogene
retro_ecab_413,
Homo sapiens ENSG00000215301 ortholog_one2many 1 retrogene
retro_hsap_4709,
Macaca mulatta ENSMMUG00000017569 ortholog_one2many 2 retrogenes
retro_mmul_1898, retro_mmul_2504,
Mus musculus ENSMUSG00000000787 ortholog_one2one 1 retrogene
retro_mmus_205,
Ornithorhynchus anatinus ENSOANG00000011274 ortholog_one2many 1 retrogene
retro_oana_64,
Pongo abelii ENSPPYG00000020257 ortholog_one2many 1 retrogene
retro_pabe_3657,
Pan troglodytes ENSPTRG00000022488 possible_ortholog 1 retrogene
retro_ptro_3130,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1415 83.66 63.99
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Download FASTA sequences of all ENSRNOG00000023383 retrocopies