Parental gene: | RPS28, ENSPTRG00000040141 |
| Aliases: | None |
| Description: | ribosomal protein S28 [Source:HGNC Symbol;Acc:10418] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:8452790..8454585(+) |
>ENSPTRG00000040141
ATGGACACCAGCCGTGTGCAGCCTATCAAGCTGGCCAGGGTCACCAAGGTCCTGGGCAGGACCGGTTCTCAGGGACAGTG
CACGCAGGTGCGCGTGGAATTCATGGACGACACGAGCCGATCCATCATCCGCAATGTAAAAGGCCCCGTGCGCGAGGGCG
ACGTGCTCACCCTTTTGGAGTCAGAGCGAGAAGCCCGGAGGTTACGCTGA
ATGGACACCAGCCGTGTGCAGCCTATCAAGCTGGCCAGGGTCACCAAGGTCCTGGGCAGGACCGGTTCTCAGGGACAGTG
CACGCAGGTGCGCGTGGAATTCATGGACGACACGAGCCGATCCATCATCCGCAATGTAAAAGGCCCCGTGCGCGAGGGCG
ACGTGCTCACCCTTTTGGAGTCAGAGCGAGAAGCCCGGAGGTTACGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 177 .49 RPM |
| SRP007412_cerebellum | 71 .02 RPM |
| SRP007412_heart | 67 .79 RPM |
| SRP007412_kidney | 248 .76 RPM |
| SRP007412_liver | 135 .03 RPM |
| SRP007412_testis | 11 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000233927 | ortholog_one2one | 9 retrogenes | |
| Loxodonta africana | ENSLAFG00000029923 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000028895 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003890 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000067288 | possible_ortholog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000042886 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_378 | 73.53 | 97.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_391 | 73.91 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_927 | 64.52 | 89.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1228 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_1613 | 96.00 | 72.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_3037 | 70.59 | 98.55 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000040141 retrocopies