Parental gene:

Fh, ENSRNOG00000003653

Aliases:Fh, Fh1
Description:fumarate hydratase, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_058701]
Organism:Rat (Rattus norvegicus)
Coordinates:13:98116500..98142647(-)


>ENSRNOG00000003653
ATGAACCGCGCATTCTGTCTCCTCGCTCGCTCGCGTCGCTTCCCGCGGGTCCCCTCCGCCGGTGCTGTATTGTCAGGGGA
AGCGGCCACCCTCCCACGGTGTGCTCCGAACGTCGTGCGAATGGCAAGCCAAAATTCCTTCCGTATAGAATACGACACCT
TTGGTGAACTGAAGGTCCCAACCGATAAGTATTATGGTGCTCAGACTGTAAGATCTACGATGAACTTTAAGATTGGAGGT
GCGACGGAGAGAATGCCAATCCCAGTCATTAAAGCATTTGGCATCTTGAAGCGAGCTGCTGCTGAAGTGAACCAGGAGTA
TGGTCTCGATCCCAAGATTGCTAGTGCAATAATGAAGGCCGCAGATGAGGTAGCTGAAGGTAAATTAAACGATCACTTTC
CTCTGGTGGTATGGCAGACTGGGTCAGGAACCCAGACGAACATGAATGTAAATGAAGTCATTAGCAACAGGGCAATCGAA
ATGCTAGGAGGTGAACTTGGCAGCAAGAAGCCCGTGCACCCCAATGATCACGTTAACAAAAGCCAGAGCTCGAATGACAC
CTTCCCCACAGCAATGCACATTGCTGCTGCACTGGAAGTTCACCAGGTCCTGTTGCCAGGATTACAGAAGCTGCACGATG
CCCTCAGTGCAAAATCCAAAGAGTTCGCGCAGGTCATAAAAATTGGGCGGACTCATACGCAGGACGCTGTCCCTCTTACT
CTTGGACAGGAGTTCAGTGGTTATGTTCAGCAAGTCCAGTATGCGATGGAGAGGATAAAAGCTGCCATGCCCAGAATCTA
CGAGCTCGCTGCTGGCGGCACTGCCGTCGGCACGGGACTAAACACCAGGATCGGCTTCGCAGAAAAGGTGGCTGCAAAAG
TCGCAGCACTCACAGGTTTGCCTTTTGTCACTGCCCCGAATAAGTTTGAAGCTCTGGCCGCTCATGATGCTCTGGTGGAG
CTTAGTGGAGCCATGAACACTACGGCCTGCAGTCTGATGAAGATTGCCAATGACATTCGCTTCCTCGGTTCTGGTCCTCG
GTCCGGTTTGGGGGAGCTGATCTTGCCTGAAAATGAGCCAGGGAGCAGCATAATGCCAGGAAAGGTGAACCCTACTCAGT
GTGAGGCGATGACCATGGTTGCAGCCCAAGTCATGGGGAATCATGTCGCTGTTACTGTTGGAGGCAGCAATGGACATTTC
GAACTGAATGTTTTTAAACCGATGATGATTAAGAATGTGTTGCACTCAGCCAGGCTACTGGGAGATGCTTCAGTGTCCTT
CACAGAGAACTGTGTGGTAGGGATCCAGGCCAACACAGAGAGGATCAACAAGCTAATGAACGAGTCTTTAATGTTGGTTA
CAGCTCTTAATCCGCATATAGGGTATGACAAAGCAGCGAAGATTGCCAAGACTGCACACAAGAACGGATCAACCTTAAAG
GAAACGGCTATTGAACTTGGCTATCTCACAGCAGAGCAGTTTGATGAGTGGGTGAAACCCAAGGACATGCTGGGTCCAAA
GTGA

Library Parental gene expression (RPM)
SRP017611_liver 114 .77 RPM
SRP017611_kidney 187 .50 RPM
SRP017611_brain 43 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017359 ortholog_one2one 1 retrogene
retro_cjac_2339,
Echinops telfairi ENSETEG00000018721 ortholog_one2one 2 retrogenes
retro_etel_1069, retro_etel_1457,
Microcebus murinus ENSMICG00000003451 ortholog_one2one 2 retrogenes
retro_mmur_1215, retro_mmur_720,
Mus musculus ENSMUSG00000026526 ortholog_one2one 1 retrogene
retro_mmus_3600,
Oryctolagus cuniculus ENSOCUG00000021494 ortholog_one2many 1 retrogene
retro_ocun_50,
Otolemur garnettii ENSOGAG00000009936 ortholog_one2one 1 retrogene
retro_ogar_322,
Xenopus tropicalis ENSXETG00000032112 ortholog_one2one 1 retrogene
retro_xtro_55,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2979 66.21 100.00
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Download FASTA sequences of all ENSRNOG00000003653 retrocopies