Parental gene:

FH, ENSXETG00000032112

Aliases:None
Description:fumarate hydratase [Source:HGNC Symbol;Acc:3700]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL172809.1:264580..292117(+)


>ENSXETG00000032112
ATGTATCGCTGTTTGTGCTCCCTTCGACACGCTGCGCGGCACAGGAAAAACCTTTCTGCGCTCGCTGTACAGTCATTAAC
AGTGAAACAGTTCAGCCCCACATGTCCCCAGACAATGCAGATTAGCACTAAGGCCAGCTCATACAGAATTGAAAGTGATA
CATTTGGAGAACTCCAAGTTCCAAATGATAAATATTATGGGGCACAAACTGTTCGTTCAACAATGAATTTCAAGATTGGA
GGTGTAACTGAAAGAATGCCAGTTCCTGTTATTAGAGCTTTTGGCATCTTAAAAAGAGCTGCTGCTGAAGTAAACCAAGA
CTATGGACTTGATCCCAACATCGCCAATTTTATTATTAAAGCAGCTGATGAGGTTTCATCTGGCAAATTGGATGATCACT
TTCCTTTGGTTGTCTGGCAAACTGGATCTGGAACACAGACAAACATGAATGTAAATGAAGTAATAAGTAATAGAGCCATT
GAGATGATGGGAGGAAAACTTGGAAGCAAAGATCCTGTGCACCCTAATGATCATGTTAACAAAAGTCAAAGTTCAAATGA
TACATTTCCTACAGCCATGCATATTGCTGCTGTAAAAGAGGTTCATGAAGTTCTTTTACCTGGACTCCAAAAGTTACACG
ATGCATTGGAAGAAAAATCCAAGGAGTTTGAGAACATTATAAAAATTGGTCGCACACACACACAAGATGCAGTGCCACTT
ACTCTTGGCCAGGAATTTGGTGGTTATGTTCAACAAATAAAATACAGTGTTAGTAGGATTAAAGCTGCATTACCACGGGT
CTATGAATTAGCAGCTGGAGGTACAGCAGTAGGAACAGGCTTAAACACCAGAATTGGATTTGCAGAAAAAGTTGCTGCAA
AAGTGGCAGAGCTAACGGGTCTGCCATTTATTACTGCACCTAATAAATTTGAATCCCTTGCTGCTCATGATGCACTCGTT
GAATTAAGTGGAGCTTTGAATACACTAGCATGTAGTCTTATGAAGATTGCTAATGACATACGGTTTCTTGGGTCCGGACC
AAGATCAGGTCTCGGAGAACTAATCCTGCCTGAAAATGAACCGGGGAGCAGCATTATGCCCGCAGGAAAAGTAAATCCTA
CACAGTGTGAGGCTGTTACTATGGTTGCATTAAGGCTTATGGCACACCATGCGTATGAAATAAGAACCTCAGGCAATGCT
TACCCCATGTTATTTCTTAAAAATCTTCAGATAAAGAATGTCCTTCAATCAATCAGGCTGCTGGGCGATGCAGCTGTGTC
ATTCACAGATAACTGCATTGTGGGAGTACAAGCCAATACAGAGAGAATCAATAAATTAATGAGCGAGTCTTTAATGCTTG
TCACTGCACTTAATCCCCATATAGCAGGATATGATAAAGCAGCAAAAATAGCAAAAACTGCCCACAAGGAAGGCACTACA
CTAAAAGAAACTGCAATTAAACTTGGATTTCTTACATCAGATCAATTTGACCAGTGGGTTAAACCAGAGGATATGCTTGG
ACCAAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 25 .76 RPM
SRP007412_skeletal_muscle 116 .70 RPM
SRP007412_heart 128 .49 RPM
SRP007412_kidney 128 .49 RPM
SRP007412_liver 57 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017359 ortholog_one2one 1 retrogene
retro_cjac_2339,
Echinops telfairi ENSETEG00000018721 ortholog_one2one 2 retrogenes
retro_etel_1069, retro_etel_1457,
Microcebus murinus ENSMICG00000003451 ortholog_one2one 2 retrogenes
retro_mmur_1215, retro_mmur_720,
Mus musculus ENSMUSG00000026526 ortholog_one2one 1 retrogene
retro_mmus_3600,
Oryctolagus cuniculus ENSOCUG00000021494 ortholog_one2many 1 retrogene
retro_ocun_50,
Otolemur garnettii ENSOGAG00000009936 ortholog_one2one 1 retrogene
retro_ogar_322,
Rattus norvegicus ENSRNOG00000003653 ortholog_one2one 1 retrogene
retro_rnor_2979,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_55 59.00 58.74
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Download FASTA sequences of all ENSXETG00000032112 retrocopies