Parental gene: | Tubb4b, ENSRNOG00000010170 |
| Aliases: | Tubb4b, Tubb2, Tubb2c |
| Description: | tubulin beta-4B chain [Source:RefSeq peptide;Acc:NP_954525] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:2422871..2425633(-) |
>ENSRNOG00000010170
ATGAGGGAGATCGTGCACCTGCAGGCTGGGCAGTGCGGCAACCAGATTGGCGCCAAGTTCTGGGAGGTAATCAGCGACGA
GCATGGCATTGATCCCACTGGCACGTACCACGGAGATAGCGACCTCCAGCTGGAGCGCATCAACGTGTACTACAACGAGG
CCACCGGTGGCAAGTATGTGCCCCGCGCTGTGCTCGTGGACTTGGAGCCCGGCACCATGGACTCGGTGCGCTCAGGGCCC
TTCGGGCAGATCTTCAGACCTGATAACTTCGTTTTTGGTCAGAGTGGGGCTGGGAACAACTGGGCCAAGGGGCACTACAC
AGAAGGTGCAGAGCTGGTTGACTCGGTGTTGGACGTTGTGAGGAAGGAAGCTGAGAGCTGTGACTGCCTGCAAGGCTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACCCTCCTTATCAGCAAGATCCGGGAGGAGTACCCA
GACAGAATCATGAACACCTTCAGTGTGGTCCCTTCCCCCAAGGTGTCGGACACAGTGGTTGAGCCCTACAATGCCACCCT
TTCAGTCCACCAGCTTGTTGAAAACACAGATGAGACCTATTGTATTGATAATGAAGCACTCTATGACATCTGCTTCAGAA
CCCTAAAGCTGACCACACCCACTTATGGTGACCTGAACCATCTAGTGTCCGCCACCATGAGTGGGGTAACCACTTGCCTA
CGATTCCCTGGCCAGCTAAATGCTGACCTGCGGAAACTGGCTGTAAATATGGTGCCCTTCCCTCGCCTGCACTTCTTCAT
GCCTGGCTTTGCCCCCTTGACCAGCCGGGGAAGCCAGCAGTACCGAGCCCTGACAGTTCCTGAGCTCACCCAGCAGATGT
TTGATGCTAAGAACATGATGGCTGCCTGTGATCCCCGCCATGGGCGCTACTTGACAGTGGCTGCCGTGTTCAGGGGCCGC
ATGTCTATGAAGGAGGTGGACGAACAGATGCTTAATGTCCAAAACAAGAACAGCAGCTACTTTGTTGAGTGGATCCCCAA
CAACGTGAAAACAGCTGTCTGTGACATTCCACCTCGGGGCCTAAAAATGTCCGCCACCTTCATTGGCAACAGCACGGCTA
TTCAGGAGCTGTTCAAACGCATCTCAGAGCAGTTCACAGCCATGTTCCGACGCAAGGCCTTCCTACACTGGTACACGGGC
GAGGGCATGGATGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAATGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
TGCTACAGCTGAGGAGGAAGGAGAGTTTGAGGAGGAGGCTGAGGAGGAGGTGGCTTAG
ATGAGGGAGATCGTGCACCTGCAGGCTGGGCAGTGCGGCAACCAGATTGGCGCCAAGTTCTGGGAGGTAATCAGCGACGA
GCATGGCATTGATCCCACTGGCACGTACCACGGAGATAGCGACCTCCAGCTGGAGCGCATCAACGTGTACTACAACGAGG
CCACCGGTGGCAAGTATGTGCCCCGCGCTGTGCTCGTGGACTTGGAGCCCGGCACCATGGACTCGGTGCGCTCAGGGCCC
TTCGGGCAGATCTTCAGACCTGATAACTTCGTTTTTGGTCAGAGTGGGGCTGGGAACAACTGGGCCAAGGGGCACTACAC
AGAAGGTGCAGAGCTGGTTGACTCGGTGTTGGACGTTGTGAGGAAGGAAGCTGAGAGCTGTGACTGCCTGCAAGGCTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACCCTCCTTATCAGCAAGATCCGGGAGGAGTACCCA
GACAGAATCATGAACACCTTCAGTGTGGTCCCTTCCCCCAAGGTGTCGGACACAGTGGTTGAGCCCTACAATGCCACCCT
TTCAGTCCACCAGCTTGTTGAAAACACAGATGAGACCTATTGTATTGATAATGAAGCACTCTATGACATCTGCTTCAGAA
CCCTAAAGCTGACCACACCCACTTATGGTGACCTGAACCATCTAGTGTCCGCCACCATGAGTGGGGTAACCACTTGCCTA
CGATTCCCTGGCCAGCTAAATGCTGACCTGCGGAAACTGGCTGTAAATATGGTGCCCTTCCCTCGCCTGCACTTCTTCAT
GCCTGGCTTTGCCCCCTTGACCAGCCGGGGAAGCCAGCAGTACCGAGCCCTGACAGTTCCTGAGCTCACCCAGCAGATGT
TTGATGCTAAGAACATGATGGCTGCCTGTGATCCCCGCCATGGGCGCTACTTGACAGTGGCTGCCGTGTTCAGGGGCCGC
ATGTCTATGAAGGAGGTGGACGAACAGATGCTTAATGTCCAAAACAAGAACAGCAGCTACTTTGTTGAGTGGATCCCCAA
CAACGTGAAAACAGCTGTCTGTGACATTCCACCTCGGGGCCTAAAAATGTCCGCCACCTTCATTGGCAACAGCACGGCTA
TTCAGGAGCTGTTCAAACGCATCTCAGAGCAGTTCACAGCCATGTTCCGACGCAAGGCCTTCCTACACTGGTACACGGGC
GAGGGCATGGATGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAATGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
TGCTACAGCTGAGGAGGAAGGAGAGTTTGAGGAGGAGGCTGAGGAGGAGGTGGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 62 .19 RPM |
| SRP017611_kidney | 84 .99 RPM |
| SRP017611_brain | 232 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000011966 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010939 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012164 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017213 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000036752 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005927 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000023373 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_742 | 83.91 | 51.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_867 | 91.43 | 70.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000010170 retrocopies