Parental gene:

Sppl2a, ENSRNOG00000011652

Aliases:Sppl2a, RGD1563001
Description:signal peptide peptidase-like 2A precursor [Source:RefSeq peptide;Acc:NP_001101240]
Organism:Rat (Rattus norvegicus)
Coordinates:3:125887345..125929935(-)


>ENSRNOG00000011652
ATGGGGTTGCTGCACTCGCTGCACGCTCCCGCTGCTGCCCTGCTGTGGAGCTGCCTGCTCGGACTGTCAGCTGCTCAGGA
AGCCATCCTTCATGCATCTGCAAATGGCGTATCTTCACTTTCCAAGGACTACTGCATGTATTATAACAACAACTGGACAC
GGCTTCCAAGTTCCCTAGAAAATGCAACTTCTCTTAGCTTGATGAATCTGACTGGCACACCACTGTGCCACCTTTCTGAT
ATTCCTCCTGATGGCATAAAGAACAAGGCAGTGGTGGTACACTGGGGACCCTGCCATTTTCTTGAAAAAGCCAAAATTGC
ACAGGAAGGTGGTGCTGCAGCGTTGCTGATTGCCAACAACAGTGTCCTAATTCCTTCCTCAAGGAACAAATCTGCATTTC
AAAATGTGACTATACTAATTGCAGTTATAACCCAAAAAGACTTTAATGATATGAAAGAGACTCTTGGAGATGACATTACC
GTGAAAATGTATTCTCCATCCTGGCCTAACTTTGACTATACTCTGGTGGTCATTTTTGTAATTGCTGTGTTCACTGTGGC
ATTAGGAGGATACTGGAGTGGACTTATTGAATTGGAAAGCATGAAGGCAGTGGAAGATGCTGAAGATAGAGAGGCAAGGA
AAAAGAAGGAAGACTACTTAACATTCAGTCCTCTCACCGTTGTCCTGTTCGTGGTCATCTGCTGTGTAATGATTGTCTTA
CTGTATTTCTTCTACAAGTGGCTTGTTTATGTTATGATAGCAATTTTCTGCATAGCATCAGCAACGAGCTTGTATAACTG
TCTCGCTGCATTGATTCATCGGATGCCATGTGGACAGTGCACGATTTTGTGTTGTGGCAAAAACATTAAAGTGAGCCTGA
TTTTCCTTTCTGGACTGTGCATCTCAGTTGCTGTTGTGTGGGCTGTGTTTCGAAATGAGGACAGGTGGGCTTGGATTTTA
CAGGATATCTTAGGAATTGCTTTCTGTCTCAACTTAATTAAAACAATGAAGTTACCCAATTTCATGTCATGTGTGATACT
GCTAGGTCTTCTCCTCATCTACGACGTGTTCTTTGTCTTCATAACACCATTCATCACAAAGAATGGAGAGAGCATCATGG
TGGAACTTGCTGCTGGGCCTTTCGAGAATGCTGAAAAGTTGCCAGTAGTTATCAGGGTGCCAAAGCTCATGGATTACTCA
GTCATGAGTGTGTGCTCAGTGCCCGTTTCAGTGCTGGGGTTCGGAGATATCATTGTTCCAGGTCTGTTGATTGCATATTG
TAGAAGATTTGATGTTCAGACTGGTTCTTCTATATACTATATATCATCTACAATTGCCTATGCTGTTGGCATGATAATTA
CCTTTGTGGTCCTAATGGTGATGAAGACAGGACAGCCTGCTCTCCTCTATTTAGTACCTTGTACACTTATTACTGCCTCA
ATCGTTGCTTGGAGTCGTAAGGAAATGAAAAAGTTCTGGAAAGGTAGCAGCTACCAGGTGATGGACTACCTGGACTATTC
AACAAATGAAGAAAACCCAGCAGCTACTGACGAGCAGATTGTACAACAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 69 .39 RPM
SRP017611_kidney 58 .48 RPM
SRP017611_brain 22 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000008946 ortholog_one2one 1 retrogene
retro_dord_754,
Homo sapiens ENSG00000138600 ortholog_one2one 1 retrogene
retro_hsap_1566,
Gorilla gorilla ENSGGOG00000013154 ortholog_one2one 1 retrogene
retro_ggor_1191,
Pongo abelii ENSPPYG00000006472 ortholog_one2one 1 retrogene
retro_pabe_1293,
Pan troglodytes ENSPTRG00000007070 ortholog_one2one 1 retrogene
retro_ptro_1054,
Rattus norvegicus ENSRNOG00000001178 within_species_paralog 1 retrogene
retro_rnor_2157,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1750 82.49 90.06
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Download FASTA sequences of all ENSRNOG00000011652 retrocopies