Parental gene:

Sri, ENSRNOG00000049780

Aliases:None
Description:sorcin [Source:RefSeq peptide;Acc:NP_001121662]
Organism:Rat (Rattus norvegicus)
Coordinates:4:22938727..22952058(-)


>ENSRNOG00000049780
ATGTCGTATCCCGGGCACCCTGGCGCTGGCGGAGGGTACTACCCAGGCGGGTGTGGAGGGGCTCCTGGGGGGCCTGTGTT
CCCTGGACACACTCAGGACCCGCTCTATGGTTACTTTGCTGCTGTGGCTGGACAGGACGGACAAATTGATGCTGACGAGT
TGCAGCGATGCCTAACTCAGTCTGGCATAGCGGGAGGATACAAACCTTTTAACCTGGAGACTTGTCGCCTTATGGTTTCA
ATGCTGGATAGAGATATGTCTGGCACGATGGGGTTCAGTGAGTTCAGAGAGCTCTGGACTGTGCTGAGTGGCTGGAGACA
ACACTTCATCAGCTTCGACAGTGATAGGAGTGGGACAGTGGATCCCCAGGAGCTGCAGAAGGCCCTAACCACTATGGGGT
TCAGGTTGAGCCCCCAAACCGTGAATTCAGTAGCAAAGCGGTACAGCACCAGCGGGAAGATCACCTTTGATGACTACATA
GCCTGCTGTGTCAAACTGAGGGCTCTCACAGATAGCTTCCGCAGACGGGATTCTGGTCAACAAGGAGTTGTGAATTTCTC
GTACGATGATTTCATCCAGTGTGTCATGACTGTCTAA

Library Parental gene expression (RPM)
SRP017611_liver 14 .46 RPM
SRP017611_kidney 63 .64 RPM
SRP017611_brain 32 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001855 ortholog_one2one 1 retrogene
retro_cfam_498,
Cavia porcellus ENSCPOG00000010096 ortholog_one2one 1 retrogene
retro_cpor_216,
Latimeria chalumnae ENSLACG00000000210 ortholog_one2one 1 retrogene
retro_lcha_89,
Loxodonta africana ENSLAFG00000027380 ortholog_one2one 2 retrogenes
retro_lafr_1186, retro_lafr_487,
Monodelphis domestica ENSMODG00000010355 ortholog_one2one 1 retrogene
retro_mdom_782,
Mustela putorius furo ENSMPUG00000018313 ortholog_one2one 1 retrogene
retro_mputfur_1147,
Pteropus vampyrus ENSPVAG00000007438 ortholog_one2one 2 retrogenes
retro_pvam_1112, retro_pvam_734,
Rattus norvegicus ENSRNOG00000013972 within_species_paralog 2 retrogenes
retro_rnor_1563, retro_rnor_2505,
Rattus norvegicus ENSRNOG00000014485 within_species_paralog 1 retrogene
retro_rnor_2840,
Ictidomys tridecemlineatus ENSSTOG00000004372 ortholog_one2one 1 retrogene
retro_itri_607,
Tupaia belangeri ENSTBEG00000004434 ortholog_one2one 1 retrogene
retro_tbel_4493,
Tarsius syrichta ENSTSYG00000014640 ortholog_one2many 1 retrogene
retro_tsyr_1832,
Xenopus tropicalis ENSXETG00000008793 ortholog_one2one 1 retrogene
retro_xtro_25,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1237 77.01 86.87
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Download FASTA sequences of all ENSRNOG00000049780 retrocopies