Parental gene: | Eif5a, ENSRNOG00000016478 |
| Aliases: | None |
| Description: | Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:Q3T1J1] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:56272203..56276711(-) |
>ENSRNOG00000016478
ATGGCAGATGATTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAGCATTACGTAA
GAATGGTTTTGTGGTGCTCAAGGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAGCATGGCCATG
CCAAGGTCCATCTGGTTGGTATTGATATTTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCGACTCATAACATGGAT
GTCCCCAACATCAAAAGGAATGATTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCCCTGCTCCAGGACAGTGGGGA
GGTACGAGAGGACCTTCGTCTGCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTATGACTGTGGAGAAGAGATCC
TGATCACAGTGCTGTCCGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA
ATGGCAGATGATTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAGCATTACGTAA
GAATGGTTTTGTGGTGCTCAAGGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAGCATGGCCATG
CCAAGGTCCATCTGGTTGGTATTGATATTTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCGACTCATAACATGGAT
GTCCCCAACATCAAAAGGAATGATTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCCCTGCTCCAGGACAGTGGGGA
GGTACGAGAGGACCTTCGTCTGCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTATGACTGTGGAGAAGAGATCC
TGATCACAGTGCTGTCCGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 136 .22 RPM |
| SRP017611_kidney | 235 .38 RPM |
| SRP017611_brain | 149 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000132507 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012032 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000006206 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006652 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007907 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_671 | 91.89 | 71.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1627 | 78.40 | 80.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1947 | 77.91 | 55.19 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000016478 retrocopies