Parental gene: | EIF5A, ENSG00000132507 |
| Aliases: | EIF5A, EIF-5A, EIF5A1, eIF5AI |
| Description: | eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:3300] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:7210317..7215774(+) |
>ENSG00000132507
ATGTGTGGAACTGGGGGGACTGATTCCAAGACAAGGCGCCCACCCCACAGAGCAAGTTTTCTGAAACGTTTGGAATCGAA
GCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAG
CATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAG
CACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCA
TAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGG
ACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGA
GAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA
ATGTGTGGAACTGGGGGGACTGATTCCAAGACAAGGCGCCCACCCCACAGAGCAAGTTTTCTGAAACGTTTGGAATCGAA
GCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAG
CATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTGGCAAG
CACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCA
TAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCTCCAGG
ACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGA
GAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 206 .78 RPM |
| bodymap2_lung | 202 .00 RPM |
| bodymap2_breast | 161 .89 RPM |
| bodymap2_adipose | 201 .22 RPM |
| bodymap2_adrenal | 249 .77 RPM |
| bodymap2_skeletal_muscle | 234 .31 RPM |
| bodymap2_thyroid | 158 .33 RPM |
| bodymap2_prostate | 116 .41 RPM |
| bodymap2_colon | 133 .92 RPM |
| bodymap2_testis | 161 .70 RPM |
| bodymap2_brain | 73 .04 RPM |
| bodymap2_heart | 69 .45 RPM |
| bodymap2_white_blood_cells | 139 .51 RPM |
| bodymap2_lymph_node | 102 .33 RPM |
| bodymap2_ovary | 136 .21 RPM |
| bodymap2_kidney | 139 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000163577 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012032 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000012459 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006206 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006652 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014230 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007907 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008674 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016478 | possible_ortholog | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000017939 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009783 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_9 | 98.05 | 83.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1788 | 88.62 | 79.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2004 | 77.98 | 89.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000132507 retrocopies