Parental gene:

RGD1560648, ENSRNOG00000018289

Aliases:Park7, CAP1, DJ-1, Dj1, SP22
Description:Protein DJ-1 [Source:UniProtKB/Swiss-Prot;Acc:O88767]
Organism:Rat (Rattus norvegicus)
Coordinates:5:171566143..171582474(-)


>ENSRNOG00000018289
ATGGCATCCAAAAGAGCTCTGGTCATCCTAGCCAAAGGAGCAGAGGAGATGGAGACAGTGATTCCTGTGGACATCATGCG
GCGAGCTGGGATTAAAGTCACCGTTGCAGGCTTGGCTGGGAAGGACCCCGTGCAGTGTAGCCGTGATGTAGTGATTTGTC
CGGATACCAGTCTGGAAGAAGCAAAAACACAGGGACCATACGATGTGGTTGTTCTTCCAGGAGGAAATCTGGGTGCACAG
AACTTATCTGAGTCGGCTTTGGTGAAGGAGATCCTCAAGGAGCAGGAGAACAGGAAGGGCCTCATAGCTGCCATCTGTGC
GGGTCCTACGGCCCTGCTGGCTCACGAAGTAGGCTTTGGATGCAAGGTTACATCGCACCCATTGGCTAAGGACAAAATGA
TGAACGGCAGTCACTACAGCTACTCAGAGAGCCGTGTGGAGAAGGACGGCCTCATCCTCACCAGCCGTGGGCCTGGGACC
AGCTTCGAGTTTGCGCTGGCCATTGTGGAGGCACTCAGTGGCAAGGACATGGCTAACCAAGTGAAGGCCCCGCTTGTTCT
CAAAGACTAG

Library Parental gene expression (RPM)
SRP017611_liver 60 .58 RPM
SRP017611_kidney 149 .05 RPM
SRP017611_brain 77 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003703 ortholog_one2many 1 retrogene
retro_amel_854,
Canis familiaris ENSCAFG00000019674 ortholog_one2many 1 retrogene
retro_cfam_1150,
Choloepus hoffmanni ENSCHOG00000004364 ortholog_one2many 7 retrogenes
retro_chof_1725, retro_chof_1877, retro_chof_2047, retro_chof_2123, retro_chof_2220, retro_chof_279, retro_chof_63,
Callithrix jacchus ENSCJAG00000000319 ortholog_many2many 4 retrogenes
retro_cjac_1348, retro_cjac_2729, retro_cjac_3210, retro_cjac_4225,
Erinaceus europaeus ENSEEUG00000013141 ortholog_one2many 1 retrogene
retro_eeur_233,
Echinops telfairi ENSETEG00000010915 ortholog_one2many 1 retrogene
retro_etel_215,
Homo sapiens ENSG00000116288 ortholog_one2many 2 retrogenes
retro_hsap_4195, retro_hsap_995,
Gorilla gorilla ENSGGOG00000012105 ortholog_one2many 2 retrogenes
retro_ggor_2812, retro_ggor_795,
Microcebus murinus ENSMICG00000008470 ortholog_one2many 2 retrogenes
retro_mmur_1294, retro_mmur_690,
Nomascus leucogenys ENSNLEG00000008790 ortholog_one2many 3 retrogenes
retro_nleu_1025, retro_nleu_2320, retro_nleu_233,
Oryctolagus cuniculus ENSOCUG00000016511 ortholog_one2many 1 retrogene
retro_ocun_1405,
Ochotona princeps ENSOPRG00000002151 ortholog_one2many 2 retrogenes
retro_opri_104, retro_opri_1173,
Pongo abelii ENSPPYG00000001925 ortholog_one2many 2 retrogenes
retro_pabe_3433, retro_pabe_840,
Pan troglodytes ENSPTRG00000000102 ortholog_one2many 3 retrogenes
retro_ptro_2848, retro_ptro_3270, retro_ptro_755,
Tupaia belangeri ENSTBEG00000009474 ortholog_one2many 13 retrogenes
retro_tbel_1182, retro_tbel_1306, retro_tbel_1405, retro_tbel_1790, retro_tbel_2059, retro_tbel_220, retro_tbel_2247, retro_tbel_2551, retro_tbel_3013, retro_tbel_4047, retro_tbel_4486, retro_tbel_4538, retro_tbel_561,
Tarsius syrichta ENSTSYG00000001455 ortholog_one2many 1 retrogene
retro_tsyr_1883,
Vicugna pacos ENSVPAG00000011076 ortholog_one2many 1 retrogene
retro_vpac_364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1229 87.04 57.14
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2. retro_rnor_2463 69.81 83.07
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Download FASTA sequences of all ENSRNOG00000018289 retrocopies