Parental gene: | Eif3k, ENSRNOG00000020495 |
| Aliases: | Eif3k, Eif3s12, PLAC-24 |
| Description: | eukaryotic translation initiation factor 3 subunit K [Source:RefSeq peptide;Acc:NP_001099712] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:89103167..89108197(-) |
>ENSRNOG00000020495
ATGCAGAGGCCATGGAGGGATCAAGCCCTGGATGAGAACATGGACCTCCTGGAAGGCATAACTGGCTTTGAAGACTCTGT
CCGAAAATTTATCTGCCATGTCGTGGGCATCACCTACCAGCACATCGACCGCTGGCTGCTGGCCGAGATGCTCGGAGACC
TGACTGACAACCAGCTGAGGGTGTGGATGAGCAAGTACGGCTGGAGCGCGGACGAGTCAGGGCAGGTCTTCATCTGCAGC
CAGGAGGAGAGCATTAAGCCCAAGAACATCGTGGAGAAGATCGACTTTGACAGTGTGTCCAGCATCATGGCCTCGTCCCA
GTAA
ATGCAGAGGCCATGGAGGGATCAAGCCCTGGATGAGAACATGGACCTCCTGGAAGGCATAACTGGCTTTGAAGACTCTGT
CCGAAAATTTATCTGCCATGTCGTGGGCATCACCTACCAGCACATCGACCGCTGGCTGCTGGCCGAGATGCTCGGAGACC
TGACTGACAACCAGCTGAGGGTGTGGATGAGCAAGTACGGCTGGAGCGCGGACGAGTCAGGGCAGGTCTTCATCTGCAGC
CAGGAGGAGAGCATTAAGCCCAAGAACATCGTGGAGAAGATCGACTTTGACAGTGTGTCCAGCATCATGGCCTCGTCCCA
GTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 11 .36 RPM |
| SRP017611_kidney | 26 .73 RPM |
| SRP017611_brain | 22 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000007594 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016808 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013314 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026260 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025857 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005313 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_513 | 72.55 | 93.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1128 | 72.55 | 95.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2039 | 69.70 | 61.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000020495 retrocopies